LOCUS       WKY03188.1               850 aa    PRT              INV 31-JUL-2023
DEFINITION  Nippostrongylus brasiliensis hypothetical protein protein.
ACCESSION   CP130735-14
PROTEIN_ID  WKY03188.1
SOURCE      Nippostrongylus brasiliensis
  ORGANISM  Nippostrongylus brasiliensis
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Strongyloidea; Heligmosomidae;
            Nippostrongylus.
REFERENCE   1  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     A Nippostrongylus brasiliensis chromosomal reference genome and its
            transcriptomics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 50441521)
  AUTHORS   Schwarz,E.M., Baniya,A., Rodriguez,I.M., Lu,D., Bobardt,S.D.,
            Anesko,K., Baker,L., Gouil,Q., Ritchie,M.E., Jex,A.R., Nair,M.G.
            and Dillman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUL-2023) Molecular Biology and Genetics, Cornell
            University, Biotechnology Bldg., 526 Campus Road, Ithaca, NY 14853,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-JUN-2022
            Assembly Method        :: raven v. 1.7.0; sourmash v. MAR-2022;
                                      racon v. 1.4.20; POLCA (in MaSuRCA) v.
                                      4.0.8; 3d-dna v. 180419
            Assembly Name          :: Nippo_1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore PromethION; Illumina
                                      HiSeq; Omni-C
            ##Genome-Assembly-Data-END##
FEATURES             Qualifiers
     source          /organism="Nippostrongylus brasiliensis"
                     /mol_type="genomic DNA"
                     /strain="MIMR"
                     /db_xref="taxon:27835"
                     /chromosome="IV"
                     /sex="pooled male and female"
                     /tissue_type="Whole animal"
                     /dev_stage="Adults"
                     /geo_loc_name="USA: Laboratory of Meera Nair, UC Riverside
                     School of Medicine, Riverside, CA"
                     /collection_date="2021/2022"
     protein         /locus_tag="Q1695_004718"
                     /note="NIPPO_CHRIV.G8558.T1"
     intron_pos      29:0 (1/20)
     intron_pos      77:0 (2/20)
     intron_pos      103:0 (3/20)
     intron_pos      147:1 (4/20)
     intron_pos      204:1 (5/20)
     intron_pos      231:1 (6/20)
     intron_pos      290:1 (7/20)
     intron_pos      349:0 (8/20)
     intron_pos      374:0 (9/20)
     intron_pos      426:0 (10/20)
     intron_pos      472:1 (11/20)
     intron_pos      520:0 (12/20)
     intron_pos      553:0 (13/20)
     intron_pos      602:2 (14/20)
     intron_pos      632:0 (15/20)
     intron_pos      665:0 (16/20)
     intron_pos      709:0 (17/20)
     intron_pos      725:2 (18/20)
     intron_pos      773:0 (19/20)
     intron_pos      821:0 (20/20)
BEGIN
        1 MSGIVLWNVF SWFHNIRYSA VDAQKRCDAN KTRILIGPCL REKYVDRAPC LCPWEGCSSI
       61 QLTENFSKRP CNMSVKTFEI QEVDNSSMQL FHSSMDFALG RIGNKCTLTY KVAVRDEVGA
      121 FEFCDAQHAF VLVRATRTAS NTICEIHTVY DCSNTEQTIG DMCFSMSAAS TISKGKKLCE
      181 AVNRNELSAL HKVTSTAQQR WISAYFSNYG IIWIANGPND IEYLLHDNLD GKRKLLNKYG
      241 RVVTGKSENY AMITRKGSLA RLRVGTIAPM DPNTAIPVLC SRRATPRQEL TSTLVERYKL
      301 VNIHSVTYKA KNGLFQPFTV VKGAFPYSGI SKDLYYIGGG ETHYKLCEGF KHGSAATTLD
      361 FDNVEDFKKL LRDADVNVVA VPGRLKRHAQ RVTNSDCSKR DSDYKKKRSN WEYQRKNVAG
      421 KYYYEDVTDK GWKDRHPDNA CADSPRVALV FSKDGLIDVP AFARHSVACT FGVLEKFGCA
      481 VNAHVKNGRC QCIDPAEELE RHVNSFVFLS SDKELLKNKE QTLCFQCTAN TEYAVVAITD
      541 ASTPPFEVSF GSAYKHVLYA YRFAFAYMKV PIRVIHVGDG GIRFDTKKFH VASFNKDLSS
      601 DTLGQSKDWL TKGSGKLALA AAFKEAIEAL KYHPYARKAI FLNVFGKGDT TAVDHEEAIK
      661 VAQQAGEYGI DVVVNHYYKG EFEATKFYPF ATTKKVFAYD WSNWGEHSKG VTRALHFMYR
      721 KICLRIAALA VHLRTLPRLD VNISNRCFVS NGIPAIPVIN LYMAMLNPLD KEANKTRILI
      781 GPCLREKYVD RAPCLCPWEG CSSIQLTENF SKRPCNMSVK TFEVQEVDNS SMQLFHSSMD
      841 FPLGRIVSCG
//