LOCUS VTS03853.1 759 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana chemotaxis partial : Globin-coupled
methyl-accepting chemotaxis protein (Modular protein)
OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1:
HAMP: PAS_9: HAMP: MCPsignal protein.
ACCESSION LR593886-8548
PROTEIN_ID VTS03853.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_70440"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D8PFN9|D8PFN9_9BACT ;
ALN/Q_length_ratio=0.735 ; DESCRIPTION=Globin-coupled
methyl-accepting chemotaxis protein (Modular protein)
OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1 ;
EVALUE=1e-154 ; Q/S_length_ratio=0.983"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A038GYS9|A0A038GYS9_9BURK ;
ALN/Q_length_ratio=0.614 ; DESCRIPTION=Chemotaxis protein
OS=Burkholderia sp. MP-1 GN=BG58_15470 PE=4 SV=1 ;
EVALUE=1e-153 ; Q/S_length_ratio=1.269"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|H0SRT6|H0SRT6_9BRAD ;
ALN/Q_length_ratio=0.577 ; DESCRIPTION=Putative
methyl-accepting chemotaxis protein (MCP) with multiple
PAS domains OS=Bradyrhizobium sp. ORS 375
GN=BRAO375_800034 PE=4 SV=1 ; EVALUE=1e-149 ;
Q/S_length_ratio=1.460"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|G0A6T8|G0A6T8_METMM ;
ALN/Q_length_ratio=0.592 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Methylomonas methanica (strain MC09) GN=Metme_2154 PE=4
SV=1 ; EVALUE=1e-145 ; Q/S_length_ratio=1.037"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|Q07SD7|Q07SD7_RHOP5 ;
ALN/Q_length_ratio=0.642 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Rhodopseudomonas palustris (strain BisA53) GN=RPE_1195
PE=4 SV=1 ; EVALUE=1e-143 ; Q/S_length_ratio=0.834"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|Y0KHL8|Y0KHL8_9PROT ;
ALN/Q_length_ratio=0.625 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Methylophilaceae bacterium 11 GN=Meth11DRAFT_1510 PE=4
SV=1 ; EVALUE=1e-142 ; Q/S_length_ratio=0.878"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A5EDT7|A5EDT7_BRASB ;
ALN/Q_length_ratio=0.630 ; DESCRIPTION=Putative
methyl-accepting chemotaxis protein (MCP) with multiple
PAS domains OS=Bradyrhizobium sp. (strain BTAi1 / ATCC
BAA-1182) GN=BBta_2145 PE=4 SV=1 ; EVALUE=1e-141 ;
Q/S_length_ratio=0.972"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|F5SZW9|F5SZW9_9GAMM ;
ALN/Q_length_ratio=0.594 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer OS=Methylophaga
aminisulfidivorans MP GN=MAMP_01685 PE=3 SV=1 ;
EVALUE=1e-140 ; Q/S_length_ratio=0.823"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M7HGY7|M7HGY7_VIBCL ;
ALN/Q_length_ratio=0.634 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae O1 str. EC-0009
GN=VCEC0009_000125 PE=4 SV=1 ; EVALUE=1e-139 ;
Q/S_length_ratio=1.199"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|J1KX17|J1KX17_VIBCL ;
ALN/Q_length_ratio=0.634 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae CP1038(11) GN=VCCP103811_0120 PE=4 SV=1
; EVALUE=1e-139 ; Q/S_length_ratio=1.199"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M7KLG1|M7KLG1_VIBCL ;
ALN/Q_length_ratio=0.634 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae O1 str. PCS-023
GN=VCPCS023_003135 PE=4 SV=1 ; EVALUE=1e-139 ;
Q/S_length_ratio=1.199"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|J1CCE8|J1CCE8_VIBCL ;
ALN/Q_length_ratio=0.634 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae CP1041(14) GN=VCCP104114_0122 PE=4 SV=1
; EVALUE=1e-139 ; Q/S_length_ratio=1.199"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A4YP70|A4YP70_BRASO ;
ALN/Q_length_ratio=0.598 ; DESCRIPTION=Putative
methyl-accepting chemotaxis protein (MCP) with multiple
PAS domains OS=Bradyrhizobium sp. (strain ORS278)
GN=BRADO1824 PE=4 SV=1 ; EVALUE=1e-139 ;
Q/S_length_ratio=0.964"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M7GCN0|M7GCN0_VIBCL ;
ALN/Q_length_ratio=0.634 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae O1 str. AG-7404
GN=VCAG7404_000103 PE=4 SV=1 ; EVALUE=1e-139 ;
Q/S_length_ratio=1.199"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|K5MZ13|K5MZ13_VIBCL ;
ALN/Q_length_ratio=0.634 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae HC-62A1 GN=VCHC62A1_0126 PE=4 SV=1 ;
EVALUE=1e-139 ; Q/S_length_ratio=1.199"
/note="Pfam_scan:hit_1 (6..184); Pfam:PF12729.2:4HB_MCP_1;
Pfam_type:Family;HMM_aln_Length:180; HMM_Length:181;
EVALUE:4.1e-24; BITSCORE: 84.9"
/note="Pfam_scan:hit_2 (191..260); Pfam:PF00672.20:HAMP;
Pfam_type:Family;HMM_aln_Length:67; HMM_Length:70;
EVALUE:2.9e-13; BITSCORE: 49.7"
/note="Pfam_scan:hit_3 (278..382); Pfam:PF13426.1:PAS_9;
Pfam_type:Domain;HMM_aln_Length:99; HMM_Length:104;
EVALUE:6.3e-14; BITSCORE: 52.2"
/note="Pfam_scan:hit_4 (404..451); Pfam:PF00672.20:HAMP;
Pfam_type:Family;HMM_aln_Length:40; HMM_Length:70;
EVALUE:7e-06; BITSCORE: 26.1"
/note="Pfam_scan:hit_5 (503..704);
Pfam:PF00015.16:MCPsignal;
Pfam_type:Family;HMM_aln_Length:210; HMM_Length:213;
EVALUE:5.9e-64; BITSCORE: 215.5"
/note="GO_domain:GO:0040011"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0016301"
/note="GO_domain:GO:0004871"
/note="Enzyme_Code:EC:2.7.3"
/note="Enzyme_Code:EC:2.7.13.3"
BEGIN
1 MSWFRNLRMA FKLGACFAIL VLLVACTGFL GLRGLGQVNE RTADVAQHAD GLNHLQEANG
61 ELLRISRAVR NAILDTDVAS VDKRASDIRK YESRFRTDFD AYQKTIAKSD TKVKAAELER
121 QFNELRPLQD EIVALARAQK DEEARAGLPR IRAMADAMDE KINELVESKQ SLIRQAKTDA
181 DATYAQVHQL VLVVVIGACV LATVLGFTLS HLTARPLQQT KILLEAVAKG DLTQHADVRS
241 TDEVGQMASA LNTAIDTLRA ARERDADYVG QITAVSKVQA VIEFRLDGTI VSANENFLRT
301 MGYSLPEIQG RHHSMFADPA LAASLEYRAF WAKLNRGEYI ASEFKRLGKG GKEVWIQASY
361 NPILDLNGKP YKVVKYATDV TVAKLMERQV RENAEQDKAR AIELQQKVAA ITTSVSALAD
421 GDFTQPVPDL GADEVGQMAH SLNKAVVSVR TALEGVREVS EQLADASAQL STASEEISTG
481 AQEQASSLEE TASTLEEITA TVRQNSDSAQ QARQLASSSR DVAEKGGQVV GNAVEAMSEI
541 NQSSKKIADI ITTIDEIAFQ TNLLALNAAV EAARAGEQGR GFAVVASEVR NLAQRSATSA
601 KEIKTLIEDS VKKVDAGTEL VNQSGTTLGD IVTSVKRVTD IITEIAAAGK EQSVGIEQVN
661 KSVSQMDSIT QRNASQTEEM SATAQTLTDQ AAHLRDLVAR FKLSGSGAPA PKVMRPKAPI
721 TKPRSAVVRA LKNGHSNGHG RSHELDRLGS DDHDGFTEF
//