LOCUS VTS03794.1 190 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana sporulation sigma factor : Sporulation
sigma factor SigE OS=Anoxybacillus sp. KU2-6(11) GN=JS80_02130
PE=4 SV=1: Sigma70_r4 protein.
ACCESSION LR593886-8528
PROTEIN_ID VTS03794.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_70640"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A094JWQ3|A0A094JWQ3_9BACI ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=Sporulation sigma
factor SigE OS=Anoxybacillus sp. KU2-6(11) GN=JS80_02130
PE=4 SV=1 ; EVALUE=3e-12 ; Q/S_length_ratio=0.795"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A0A0A2SNK7|A0A0A2SNK7_9BACI ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=Sporulation sigma
factor SigE OS=Anoxybacillus gonensis GN=NP92_07025 PE=4
SV=1 ; EVALUE=6e-12 ; Q/S_length_ratio=0.795"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|B7GFE5|B7GFE5_ANOFW ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=RNA polymerase
sigma factor OS=Anoxybacillus flavithermus (strain DSM
21510 / WK1) GN=sigE PE=3 SV=1 ; EVALUE=6e-12 ;
Q/S_length_ratio=0.795"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|R4G0V4|R4G0V4_9BACI ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=RNA polymerase
sigma factor OS=Anoxybacillus flavithermus NBRC 109594
GN=KN10_1739 PE=3 SV=1 ; EVALUE=6e-12 ;
Q/S_length_ratio=0.795"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|T0B3A5|T0B3A5_9BACI ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=RNA polymerase
sigma factor OS=Anoxybacillus sp. SK3-4 GN=C289_1430 PE=3
SV=1 ; EVALUE=7e-12 ; Q/S_length_ratio=0.795"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M5QWL3|M5QWL3_9BACI ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=RNA polymerase
sigma factor OS=Anoxybacillus sp. DT3-1 GN=F510_0059 PE=3
SV=1 ; EVALUE=7e-12 ; Q/S_length_ratio=0.795"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|G4HE92|G4HE92_9BACL ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=RNA polymerase
sigma factor OS=Paenibacillus lactis 154
GN=PaelaDRAFT_2303 PE=3 SV=1 ; EVALUE=8e-12 ;
Q/S_length_ratio=0.792"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|W4CPR8|W4CPR8_9BACL ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=RNA polymerase
sigma factor OS=Paenibacillus sp. FSL H8-457 GN=C172_30483
PE=3 SV=1 ; EVALUE=1e-11 ; Q/S_length_ratio=0.792"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|V9G3R5|V9G3R5_9BACL ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=RNA polymerase
sigma factor OS=Paenibacillus sp. JCM 10914
GN=JCM10914_309 PE=3 SV=1 ; EVALUE=1e-11 ;
Q/S_length_ratio=0.792"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|W4BF82|W4BF82_9BACL ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=RNA polymerase
sigma factor OS=Paenibacillus sp. FSL R5-808 GN=C169_05197
PE=3 SV=1 ; EVALUE=1e-11 ; Q/S_length_ratio=0.792"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|E5YUG3|E5YUG3_9BACL ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=RNA polymerase
sigma factor OS=Paenibacillus vortex V453 GN=PVOR_11369
PE=3 SV=1 ; EVALUE=1e-11 ; Q/S_length_ratio=0.792"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F3M316|F3M316_9BACL ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=RNA polymerase
sigma factor OS=Paenibacillus sp. HGF5 GN=sigE PE=3 SV=1 ;
EVALUE=1e-11 ; Q/S_length_ratio=0.792"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|D3E580|D3E580_GEOS4 ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=RNA polymerase
sigma factor OS=Geobacillus sp. (strain Y412MC10)
GN=GYMC10_1824 PE=3 SV=1 ; EVALUE=1e-11 ;
Q/S_length_ratio=0.792"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A073K0T3|A0A073K0T3_9BACI ;
ALN/Q_length_ratio=0.926 ; DESCRIPTION=RNA polymerase
sigma factor OS=Bacillus manliponensis GN=BAMA_08885 PE=3
SV=1 ; EVALUE=3e-11 ; Q/S_length_ratio=0.795"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M8D7Z5|M8D7Z5_9BACI ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=RNA polymerase
sigma factor OS=Anoxybacillus flavithermus AK1
GN=H919_02742 PE=3 SV=1 ; EVALUE=3e-11 ;
Q/S_length_ratio=0.795"
/note="Pfam_scan:hit_1 (121..174);
Pfam:PF04545.11:Sigma70_r4;
Pfam_type:Domain;HMM_aln_Length:49; HMM_Length:50;
EVALUE:3.4e-17; BITSCORE: 61.4"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0001071"
/note="GO_domain:GO:0000988"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MSAATVSPAK DARSLLAANV RLFHWYAKKH VPPGLVEDVV SEAAIAFLRF FDPARCEGAS
61 GFVRIVVRSA AHKFRTREAL HTSRRHECHG AEAETDGTEN LEERRHEMGL EPDELGPLER
121 ALDQLDDRSR SILALRFGLN GAEELSLRSL GARLGVSGER VSQLEHKALK RLRELLSPAP
181 DTNRGPHHER
//