LOCUS VTS03785.1 558 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana resolvase domain-containing protein
: Recombinase OS=Nitrobacter hamburgensis (strain X14
/ DSM 10229) GN=Nham_0143 PE=4 SV=1: Resolvase: Recombinase
protein.
ACCESSION LR593886-8525
PROTEIN_ID VTS03785.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_70670"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|Q1QRV3|Q1QRV3_NITHX ;
ALN/Q_length_ratio=0.513 ; DESCRIPTION=Recombinase
OS=Nitrobacter hamburgensis (strain X14 / DSM 10229)
GN=Nham_0143 PE=4 SV=1 ; EVALUE=4e-62 ;
Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|H8EI21|H8EI21_CLOTM ;
ALN/Q_length_ratio=0.606 ; DESCRIPTION=Resolvase
domain-containing protein OS=Ruminiclostridium
thermocellum AD2 GN=AD2_2907 PE=4 SV=1 ; EVALUE=2e-61 ;
Q/S_length_ratio=1.457"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|E6UT30|E6UT30_CLOTL ;
ALN/Q_length_ratio=0.606 ; DESCRIPTION=Resolvase domain
protein OS=Clostridium thermocellum (strain DSM 1313 / LMG
6656 / LQ8) GN=Clo1313_1643 PE=4 SV=1 ; EVALUE=2e-61 ;
Q/S_length_ratio=1.457"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|H8EL64|H8EL64_CLOTM ;
ALN/Q_length_ratio=0.606 ; DESCRIPTION=Resolvase
domain-containing protein OS=Ruminiclostridium
thermocellum YS GN=YSBL_0969 PE=4 SV=1 ; EVALUE=2e-61 ;
Q/S_length_ratio=1.457"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|C7HJH4|C7HJH4_CLOTM ;
ALN/Q_length_ratio=0.606 ; DESCRIPTION=Resolvase domain
protein OS=Ruminiclostridium thermocellum DSM 2360
GN=ClothDRAFT_2833 PE=4 SV=1 ; EVALUE=2e-61 ;
Q/S_length_ratio=1.457"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|G9A697|G9A697_RHIFH ;
ALN/Q_length_ratio=0.694 ; DESCRIPTION=Site-specific
recombinase OS=Rhizobium fredii (strain HH103)
GN=SFHH103_03916 PE=4 SV=1 ; EVALUE=7e-60 ;
Q/S_length_ratio=1.434"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K0WFQ9|K0WFQ9_9RHIZ ;
ALN/Q_length_ratio=0.887 ; DESCRIPTION=Site-specific
recombinase OS=Rhizobium sp. Pop5 GN=RCCGEPOP_06266 PE=4
SV=1 ; EVALUE=2e-56 ; Q/S_length_ratio=0.970"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A077F7Z7|A0A077F7Z7_9PSED ;
ALN/Q_length_ratio=0.582 ;
DESCRIPTION=Recombinase/resolvase OS=Pseudomonas
alkylphenolia GN=PSAKL28_11840 PE=4 SV=1 ; EVALUE=4e-56 ;
Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|S2ET53|S2ET53_9PSED ;
ALN/Q_length_ratio=0.584 ; DESCRIPTION=Uncharacterized
protein OS=Pseudomonas sp. G5(2012) GN=PG5_45890 PE=4 SV=1
; EVALUE=2e-55 ; Q/S_length_ratio=0.843"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q3J212|Q3J212_RHOS4 ;
ALN/Q_length_ratio=0.719 ; DESCRIPTION=Putative
site-specific recombinase OS=Rhodobacter sphaeroides
(strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
GN=RSP_0003 PE=4 SV=2 ; EVALUE=3e-55 ;
Q/S_length_ratio=0.959"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A095GKH3|A0A095GKH3_BURML ;
ALN/Q_length_ratio=0.862 ; DESCRIPTION=Recombinase family
protein OS=Burkholderia mallei GN=DM48_4578 PE=4 SV=1 ;
EVALUE=6e-55 ; Q/S_length_ratio=1.096"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|B8DJ05|B8DJ05_DESVM ;
ALN/Q_length_ratio=0.570 ; DESCRIPTION=Recombinase
OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637)
GN=DvMF_2727 PE=4 SV=1 ; EVALUE=7e-55 ;
Q/S_length_ratio=0.946"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|Q1Z7J0|Q1Z7J0_PHOPR ;
ALN/Q_length_ratio=0.599 ; DESCRIPTION=Site-specific
recombinase OS=Photobacterium profundum 3TCK
GN=P3TCK_14970 PE=4 SV=1 ; EVALUE=1e-54 ;
Q/S_length_ratio=0.916"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|V9UP60|V9UP60_9PSED ;
ALN/Q_length_ratio=0.582 ; DESCRIPTION=Recombinase
OS=Pseudomonas monteilii SB3078 GN=X969_20345 PE=4 SV=1 ;
EVALUE=2e-54 ; Q/S_length_ratio=0.989"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|Q30XM6|Q30XM6_DESAG ;
ALN/Q_length_ratio=0.910 ; DESCRIPTION=Recombinase
OS=Desulfovibrio alaskensis (strain G20) GN=Dde_2774 PE=4
SV=2 ; EVALUE=2e-54 ; Q/S_length_ratio=0.887"
/note="Pfam_scan:hit_1 (5..168);
Pfam:PF00239.16:Resolvase;
Pfam_type:Domain;HMM_aln_Length:138; HMM_Length:141;
EVALUE:2.3e-16; BITSCORE: 59.9"
/note="Pfam_scan:hit_2 (190..294);
Pfam:PF07508.8:Recombinase;
Pfam_type:Family;HMM_aln_Length:98; HMM_Length:102;
EVALUE:3.8e-12; BITSCORE: 46.3"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0006259"
BEGIN
1 MKAVAYSYLR FSSPQQATGD SIRRQVEATT SWCQRNNVAL DESIKLRDNG VSAFKGAHRN
61 NPDVHALAGF LNAVKSGRVP SGSFLIVESL DRLTREELGE AVELVLSLVN RGVKIVQLQP
121 IESVLQKPVD ITALVLAVVE LSRGHSESKM KSERVGAAWA RKQKEAATRV VTRRLPGWID
181 YVDGKLVLNS TKAAVVRRLF SMAHDGMGVF VISKKLNTEN VPVIGRTHFK GRPMEWCQTS
241 IYAILKSRAT IGDYVPYKCR GEGRKPQGEP VPGYFPPVID EATFYAVQKG LETRGKVRGK
301 RGKHVNMFAG LLTDARNGGS LTYRHPKGKP SQLVPVDSNN GRTGEWVSFP AAAFEACILS
361 QLVEVKASDI EGAGDGAREV EVASGKLSET EELIRLWEAK MDDPKIVDTV AAKLAGLNVL
421 RRERTEALAE AQRKAASPIS EAWGEFRTLA DVIASDNSDE LRVRIRSALR RAVESVTCLF
481 VGKSGFRLCA ARVQFVTGAH RDYVIRTLQR YNGREPSPPQ VMSANWPTEA GEIDLRKRAD
541 ARLVEGVLEE LDVDRFGR
//