LOCUS VTS03722.1 488 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana transcription termination factor :
NusA antitermination factor OS=Planctomyces brasiliensis
(strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401
/ IFAM 1448) GN=Plabr_3541 PE=3 SV=1: NusA_N: NusA_N:
S1: KH_5 protein.
ACCESSION LR593886-8504
PROTEIN_ID VTS03722.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_70880"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|F0SP35|F0SP35_PLABD ;
ALN/Q_length_ratio=0.783 ; DESCRIPTION=NusA
antitermination factor OS=Planctomyces brasiliensis
(strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 /
IFAM 1448) GN=Plabr_3541 PE=3 SV=1 ; EVALUE=1e-151 ;
Q/S_length_ratio=0.984"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DK64|L0DK64_SINAD ;
ALN/Q_length_ratio=0.900 ; DESCRIPTION=Transcription
termination factor NusA OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_5506 PE=3 SV=1 ; EVALUE=1e-149 ;
Q/S_length_ratio=0.882"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|E8QYY6|E8QYY6_ISOPI ;
ALN/Q_length_ratio=0.785 ; DESCRIPTION=NusA
antitermination factor OS=Isosphaera pallida (strain ATCC
43644 / DSM 9630 / IS1B) GN=Isop_1538 PE=3 SV=1 ;
EVALUE=1e-145 ; Q/S_length_ratio=0.938"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D5SQ09|D5SQ09_PLAL2 ;
ALN/Q_length_ratio=0.850 ; DESCRIPTION=Transcription
termination factor NusA OS=Planctomyces limnophilus
(strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
GN=Plim_2559 PE=1 SV=1 ; EVALUE=1e-145 ;
Q/S_length_ratio=1.104"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A6CF45|A6CF45_9PLAN ;
ALN/Q_length_ratio=0.773 ; DESCRIPTION=Transcription
elongation factor NusA OS=Planctomyces maris DSM 8797
GN=PM8797T_17769 PE=3 SV=1 ; EVALUE=1e-142 ;
Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|D2R7W7|D2R7W7_PIRSD ;
ALN/Q_length_ratio=0.770 ; DESCRIPTION=NusA
antitermination factor OS=Pirellula staleyi (strain ATCC
27377 / DSM 6068 / ICPB 4128) GN=Psta_4656 PE=3 SV=1 ;
EVALUE=1e-136 ; Q/S_length_ratio=1.208"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|M5TUH9|M5TUH9_9PLAN ;
ALN/Q_length_ratio=0.752 ; DESCRIPTION=Transcription
elongation factor NusA OS=Rhodopirellula sallentina SM41
GN=RSSM_05732 PE=3 SV=1 ; EVALUE=1e-131 ;
Q/S_length_ratio=0.955"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5SVX4|M5SVX4_9PLAN ;
ALN/Q_length_ratio=0.838 ; DESCRIPTION=Transcription
elongation factor NusA OS=Rhodopirellula sp. SWK7
GN=RRSWK_06501 PE=3 SV=1 ; EVALUE=1e-131 ;
Q/S_length_ratio=0.938"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A3ZU79|A3ZU79_9PLAN ;
ALN/Q_length_ratio=0.797 ; DESCRIPTION=Transcription
elongation factor NusA OS=Blastopirellula marina DSM 3645
GN=DSM3645_21614 PE=3 SV=1 ; EVALUE=1e-128 ;
Q/S_length_ratio=1.148"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|L7CBT3|L7CBT3_RHOBT ;
ALN/Q_length_ratio=0.830 ; DESCRIPTION=Transcription
elongation factor NusA OS=Rhodopirellula baltica SWK14
GN=RBSWK_05498 PE=3 SV=1 ; EVALUE=1e-127 ;
Q/S_length_ratio=0.980"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M2A3G0|M2A3G0_9PLAN ;
ALN/Q_length_ratio=0.988 ; DESCRIPTION=Transcription
elongation factor NusA OS=Rhodopirellula europaea 6C
GN=RE6C_05681 PE=3 SV=1 ; EVALUE=1e-127 ;
Q/S_length_ratio=0.986"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F2AN19|F2AN19_RHOBT ;
ALN/Q_length_ratio=0.830 ; DESCRIPTION=Transcription
elongation factor NusA OS=Rhodopirellula baltica WH47
GN=nusA PE=3 SV=1 ; EVALUE=1e-127 ;
Q/S_length_ratio=0.980"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M5SSL3|M5SSL3_9PLAN ;
ALN/Q_length_ratio=0.830 ; DESCRIPTION=Transcription
elongation factor NusA OS=Rhodopirellula europaea SH398
GN=RESH_00171 PE=3 SV=1 ; EVALUE=1e-127 ;
Q/S_length_ratio=0.980"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|Q7URQ7|Q7URQ7_RHOBA ;
ALN/Q_length_ratio=0.830 ; DESCRIPTION=N utilization
substance protein A OS=Rhodopirellula baltica (strain SH1)
GN=nusA PE=3 SV=1 ; EVALUE=1e-126 ;
Q/S_length_ratio=0.980"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|K5D9H5|K5D9H5_RHOBT ;
ALN/Q_length_ratio=0.830 ; DESCRIPTION=Transcription
elongation factor NusA OS=Rhodopirellula baltica SH28
GN=RBSH_01306 PE=3 SV=1 ; EVALUE=1e-126 ;
Q/S_length_ratio=0.980"
/note="Pfam_scan:hit_1 (16..72); Pfam:PF08529.6:NusA_N;
Pfam_type:Domain;HMM_aln_Length:51; HMM_Length:122;
EVALUE:3.2e-08; BITSCORE: 33.6"
/note="Pfam_scan:hit_2 (69..105); Pfam:PF08529.6:NusA_N;
Pfam_type:Domain;HMM_aln_Length:30; HMM_Length:122;
EVALUE:8.4e-08; BITSCORE: 32.2"
/note="Pfam_scan:hit_3 (112..178); Pfam:PF00575.18:S1;
Pfam_type:Domain;HMM_aln_Length:62; HMM_Length:74;
EVALUE:3.5e-08; BITSCORE: 33.3"
/note="Pfam_scan:hit_4 (209..277); Pfam:PF13184.1:KH_5;
Pfam_type:Domain;HMM_aln_Length:67; HMM_Length:69;
EVALUE:2.3e-24; BITSCORE: 84.9"
/note="GO_domain:GO:0003723"
/note="GO_domain:GO:0001071"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MAIKKEKEKI DNTGAKILEL VDKLHEERKI AKDVIFKGIA SAIQVAAERH FQVEEGVFVS
61 IDEATGHIVA KYGDQELDPI TLGRIAAQSA KQMIIQKIRE AESDTVYNEF TGKKYELLVG
121 TVTRVDAGTA IVSLGKSEAL LPRSEQIPGE THHVGERVKA IVMEVRKQGN RVKIVLSRAH
181 PEFVKALFEE EIPEIDERII DIRAVAREAG YRSKVAVTSI DMKVDAVGAC VGVRGSRIKN
241 VIEELNGERI DIVRWNDALQ VLIPNALQPA QISDVFTYPR LGRAIVLVTD DQLSLAIGRR
301 GQNVRLASKL VGWDIEIMTH DELAESLERA ERWFGQLPNA SLELTNVLIE EGFLSYNDIT
361 CIDAAGLAEF SGLPEDQADE VVMYAEEYAD VMEQSVEDER RQAEEQARVD AEQAQADAEA
421 QAAEGGDGAE GAAAETGEVA EGAEGLASSD VGETSEVSEP EEPAIVSNSS EETETPAPAP
481 SDAEKPAE
//