LOCUS VTS03719.1 1168 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana translation initiation factor if-2
: Translation initiation factor IF-2 OS=Isosphaera pallida
(strain ATCC 43644 / DSM 9630 / IS1B) GN=infB PE=3 SV=
1: IF2_N: GTP_EFTU: GTP_EFTU_D2: IF-2 protein.
ACCESSION LR593886-8503
PROTEIN_ID VTS03719.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_70890"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|E8QYY5|E8QYY5_ISOPI ;
ALN/Q_length_ratio=0.520 ; DESCRIPTION=Translation
initiation factor IF-2 OS=Isosphaera pallida (strain ATCC
43644 / DSM 9630 / IS1B) GN=infB PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.950"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|M5SCP2|M5SCP2_9PLAN ;
ALN/Q_length_ratio=0.510 ; DESCRIPTION=Translation
initiation factor IF-2 OS=Rhodopirellula europaea SH398
GN=infB PE=3 SV=1 ; EVALUE=1e-179 ;
Q/S_length_ratio=1.125"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5TUV4|M5TUV4_9PLAN ;
ALN/Q_length_ratio=0.507 ; DESCRIPTION=Translation
initiation factor IF-2 OS=Rhodopirellula sallentina SM41
GN=infB PE=3 SV=1 ; EVALUE=1e-173 ;
Q/S_length_ratio=1.186"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|M5SVZ7|M5SVZ7_9PLAN ;
ALN/Q_length_ratio=0.507 ; DESCRIPTION=Translation
initiation factor IF-2 OS=Rhodopirellula sp. SWK7 GN=infB
PE=3 SV=1 ; EVALUE=1e-173 ; Q/S_length_ratio=1.185"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|M5RG25|M5RG25_9PLAN ;
ALN/Q_length_ratio=0.622 ; DESCRIPTION=Translation
initiation factor IF-2 OS=Rhodopirellula maiorica SM1
GN=infB PE=3 SV=1 ; EVALUE=1e-170 ;
Q/S_length_ratio=1.181"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L0DLU7|L0DLU7_SINAD ;
ALN/Q_length_ratio=0.453 ; DESCRIPTION=Translation
initiation factor IF-2 OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=infB PE=3 SV=1 ; EVALUE=1e-167 ;
Q/S_length_ratio=1.492"
/note="BLAST_uniprot:hit_7 ; ACCESSION=Q67P86 ;
ALN/Q_length_ratio=0.494 ; DESCRIPTION=Translation
initiation factor IF-2 OS=Symbiobacterium thermophilum
(strain T / IAM 14863) GN=infB PE=3 SV=1 ; EVALUE=1e-160 ;
Q/S_length_ratio=1.119"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|E4NHV3|E4NHV3_KITSK ;
ALN/Q_length_ratio=0.473 ; DESCRIPTION=Translation
initiation factor IF-2 OS=Kitasatospora setae (strain ATCC
33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 /
KM-6054) GN=infB PE=3 SV=1 ; EVALUE=1e-155 ;
Q/S_length_ratio=1.129"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A017T119|A0A017T119_9DELT ;
ALN/Q_length_ratio=0.502 ; DESCRIPTION=Translation
initiation factor IF-2 OS=Chondromyces apiculatus DSM 436
GN=infB PE=3 SV=1 ; EVALUE=1e-154 ;
Q/S_length_ratio=1.086"
/note="BLAST_uniprot:hit_10 ; ACCESSION=Q82K53 ;
ALN/Q_length_ratio=0.503 ; DESCRIPTION=Translation
initiation factor IF-2 OS=Streptomyces avermitilis (strain
ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL
8165 / MA-4680) GN=infB PE=3 SV=1 ; EVALUE=1e-153 ;
Q/S_length_ratio=1.117"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A079V942|A0A079V942_STRRM ;
ALN/Q_length_ratio=0.492 ; DESCRIPTION=Translation
initiation factor IF-2 OS=Streptomyces rimosus GN=infB
PE=3 SV=1 ; EVALUE=1e-153 ; Q/S_length_ratio=1.148"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|H2JZ52|H2JZ52_STRHJ ;
ALN/Q_length_ratio=0.471 ; DESCRIPTION=Translation
initiation factor IF-2 OS=Streptomyces hygroscopicus
subsp. jinggangensis (strain 5008) GN=infB PE=3 SV=1 ;
EVALUE=1e-152 ; Q/S_length_ratio=1.286"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|F3NFF4|F3NFF4_9ACTO ;
ALN/Q_length_ratio=0.495 ; DESCRIPTION=Translation
initiation factor IF-2 OS=Streptomyces griseoaurantiacus
M045 GN=infB PE=3 SV=1 ; EVALUE=1e-152 ;
Q/S_length_ratio=1.145"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|S3B0K0|S3B0K0_9ACTO ;
ALN/Q_length_ratio=0.506 ; DESCRIPTION=Translation
initiation factor IF-2 OS=Streptomyces sp. HPH0547 GN=infB
PE=3 SV=1 ; EVALUE=1e-152 ; Q/S_length_ratio=1.169"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M1NC19|M1NC19_STRHY ;
ALN/Q_length_ratio=0.471 ; DESCRIPTION=Translation
initiation factor IF-2 OS=Streptomyces hygroscopicus
subsp. jinggangensis TL01 GN=infB PE=3 SV=1 ;
EVALUE=1e-152 ; Q/S_length_ratio=1.286"
/note="Pfam_scan:hit_1 (14..66); Pfam:PF04760.10:IF2_N;
Pfam_type:Family;HMM_aln_Length:47; HMM_Length:54;
EVALUE:1e-05; BITSCORE: 25.0"
/note="Pfam_scan:hit_2 (646..821);
Pfam:PF00009.22:GTP_EFTU;
Pfam_type:Domain;HMM_aln_Length:178; HMM_Length:188;
EVALUE:3.4e-38; BITSCORE: 130.9"
/note="Pfam_scan:hit_3 (850..909);
Pfam:PF03144.20:GTP_EFTU_D2;
Pfam_type:Domain;HMM_aln_Length:63; HMM_Length:74;
EVALUE:2.4e-06; BITSCORE: 27.5"
/note="Pfam_scan:hit_4 (943..1054); Pfam:PF11987.3:IF-2;
Pfam_type:Domain;HMM_aln_Length:103; HMM_Length:109;
EVALUE:3.1e-31; BITSCORE: 107.4"
/note="GO_domain:GO:0003924"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0008135"
/note="GO_domain:GO:0005840"
/note="Enzyme_Code:EC:3.6.1"
/note="Enzyme_Code:EC:3.6.1.15"
BEGIN
1 MSNTTSKDTK DAKEKKVRVF TLAKELNVES KLLLDYCKEL GYADITNQLS GLLPEQADAL
61 KERTKKGPKA GPGHPPAPAP GVPPKNVIPS IAKQPIQTIP KPLPKPAAKP AEPVAPVVAQ
121 PAAPPPVVSA PAAVSPPPAP AHEPVAPPAP VVVAEAPVKP VAPATPVAPP APPKNVIPSL
181 GSGGMRNLNL GGRPTTLTPP RSNAPVAPTP AVPVAPAAAA PVAEAKPTPV APPPVVAETP
241 PAAPTPAVPA APAAPKPVVT PTAVESKPAA PATPTVTASA APAAPTAAPK PAPTVQAPPA
301 PPPGPPKNII PSNMGQPSRP SVLSRAPAPP PPKHIAAPRT GGGAPPPGAN QRSPSGVTGA
361 PGPRQPGPGS GGPGQGGNAP GGAGGPRGPG GGRPGPGGPP KPPGAAGQSV KLTPEMIDRL
421 RQASARGQRV SLNEITRTPA AAPGGAPSKP NEPARPGGPP RPGAAPGFPP RPGDGGGEEE
481 EEKKKGGVIG RDSRHKGRTG ADRGRSSGGP RVDRGSVVIG SGGVEMVEQQ WGSRRGPRQA
541 LLNKMKRRGQ QQVTVKEGKI EIGLPITVRS LSEAIGMKTS ELSKRLLKET NQLFGNNSQV
601 DFDTAALIAV EKNIELVIKR QKTAEEILIE EFEGLVTNVD PEKLRPRPPV VTIMGHVDHG
661 KTSLLDKIRR SNVVAGEVGG ITQVIRAWSV THKIEDPETG EKVIERPITF LDTPGHEAFT
721 KMRARGANVT DIAVIVVAAT DGVMPQTEEA VAHARAADVR VIVAINKVDA PNANVDRTRR
781 QLYNLELLPD DMGGDIQFVE TSALTGQGID DLLNAILIEA EINLADDLQA DPDRPAFGTC
841 LEAYMTSDEG VMATVLVQQG TLKVGDIVLC GANYGRVRSM QNDLGVPIEE AGPSTPVRIT
901 GLGGVPNADD PFYVVEELTT AAKIAEAREK KDREAALNRF TAVKDLEMLS AAKSKLKITE
961 LKVILKAEAR GSVEAIRKEL EKLTHEEVTT RVLHAGIGAI TESDVQLALT SPQDTLIVGF
1021 NVTADDAALK LAEGRGISLR EYQIIYNLVD DVKAALEGRL KPIEEVVHLG RAVVRQTFKH
1081 GKVGTIAGCY VTSGVLERSA RVRLIRGGIV VFPPADKVVG LDSLKRFKDD AKEVREGFEC
1141 GLKITGFDDI KVDDVIEAFK IEIRQRTL
//