LOCUS VTS03713.1 172 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana ribosome-binding factor a : Ribosome-
binding factor A OS=Planctomyces limnophilus (strain ATCC
43296 / DSM 3776 / IFAM 1008 / 290) GN=rbfA PE=3 SV=1:
RBFA protein.
ACCESSION LR593886-8501
PROTEIN_ID VTS03713.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_70910"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D5SQ07|D5SQ07_PLAL2 ;
ALN/Q_length_ratio=0.721 ; DESCRIPTION=Ribosome-binding
factor A OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=rbfA PE=3 SV=1 ;
EVALUE=7e-37 ; Q/S_length_ratio=0.869"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|E8QYY4|E8QYY4_ISOPI ;
ALN/Q_length_ratio=0.843 ; DESCRIPTION=Ribosome-binding
factor A OS=Isosphaera pallida (strain ATCC 43644 / DSM
9630 / IS1B) GN=rbfA PE=3 SV=1 ; EVALUE=9e-36 ;
Q/S_length_ratio=0.956"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|F0SP37|F0SP37_PLABD ;
ALN/Q_length_ratio=0.640 ; DESCRIPTION=Ribosome-binding
factor A OS=Planctomyces brasiliensis (strain ATCC 49424 /
DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=rbfA
PE=3 SV=1 ; EVALUE=5e-34 ; Q/S_length_ratio=1.147"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A6CF42|A6CF42_9PLAN ;
ALN/Q_length_ratio=0.773 ; DESCRIPTION=Ribosome-binding
factor A OS=Planctomyces maris DSM 8797 GN=rbfA PE=3 SV=1
; EVALUE=4e-33 ; Q/S_length_ratio=1.237"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|L0DJS4|L0DJS4_SINAD ;
ALN/Q_length_ratio=0.773 ; DESCRIPTION=Ribosome-binding
factor A OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=rbfA PE=3
SV=1 ; EVALUE=6e-33 ; Q/S_length_ratio=1.139"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M5RG94|M5RG94_9PLAN ;
ALN/Q_length_ratio=0.767 ; DESCRIPTION=Ribosome-binding
factor A OS=Rhodopirellula maiorica SM1 GN=rbfA PE=3 SV=1
; EVALUE=6e-32 ; Q/S_length_ratio=1.096"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|D2R7W9|D2R7W9_PIRSD ;
ALN/Q_length_ratio=0.640 ; DESCRIPTION=Ribosome-binding
factor A OS=Pirellula staleyi (strain ATCC 27377 / DSM
6068 / ICPB 4128) GN=rbfA PE=3 SV=1 ; EVALUE=1e-31 ;
Q/S_length_ratio=1.042"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A3ZU77|A3ZU77_9PLAN ;
ALN/Q_length_ratio=0.640 ; DESCRIPTION=Ribosome-binding
factor A OS=Blastopirellula marina DSM 3645 GN=rbfA PE=3
SV=1 ; EVALUE=7e-31 ; Q/S_length_ratio=1.246"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M2AUC2|M2AUC2_9PLAN ;
ALN/Q_length_ratio=0.785 ; DESCRIPTION=Ribosome-binding
factor A OS=Rhodopirellula europaea 6C GN=rbfA PE=3 SV=1 ;
EVALUE=3e-29 ; Q/S_length_ratio=1.255"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F2AN22|F2AN22_RHOBT ;
ALN/Q_length_ratio=0.785 ; DESCRIPTION=Ribosome-binding
factor A OS=Rhodopirellula baltica WH47 GN=rbfA PE=3 SV=1
; EVALUE=4e-29 ; Q/S_length_ratio=1.255"
/note="BLAST_uniprot:hit_14 ; ACCESSION=Q7URR1 ;
ALN/Q_length_ratio=0.785 ; DESCRIPTION=Ribosome-binding
factor A OS=Rhodopirellula baltica (strain SH1) GN=rbfA
PE=3 SV=1 ; EVALUE=4e-29 ; Q/S_length_ratio=1.255"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|L7C941|L7C941_RHOBT ;
ALN/Q_length_ratio=0.785 ; DESCRIPTION=Ribosome-binding
factor A OS=Rhodopirellula baltica SWK14 GN=rbfA PE=3 SV=1
; EVALUE=4e-29 ; Q/S_length_ratio=1.255"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M5SCQ9|M5SCQ9_9PLAN ;
ALN/Q_length_ratio=0.785 ; DESCRIPTION=Ribosome-binding
factor A OS=Rhodopirellula europaea SH398 GN=rbfA PE=3
SV=1 ; EVALUE=4e-29 ; Q/S_length_ratio=1.255"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|K5CHA1|K5CHA1_RHOBT ;
ALN/Q_length_ratio=0.785 ; DESCRIPTION=Ribosome-binding
factor A OS=Rhodopirellula baltica SH28 GN=rbfA PE=3 SV=1
; EVALUE=4e-29 ; Q/S_length_ratio=1.255"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|I3IQY2|I3IQY2_9PLAN ;
ALN/Q_length_ratio=0.640 ; DESCRIPTION=Ribosome-binding
factor A OS=planctomycete KSU-1 GN=rbfA PE=3 SV=1 ;
EVALUE=1e-28 ; Q/S_length_ratio=1.410"
/note="Pfam_scan:hit_1 (5..108); Pfam:PF02033.13:RBFA;
Pfam_type:Family;HMM_aln_Length:103; HMM_Length:104;
EVALUE:1.5e-29; BITSCORE: 102.1"
/note="GO_domain:GO:0042254"
/note="GO_domain:GO:0034641"
BEGIN
1 MKSHRIARVS EVIRETAANA ILFELKDPRV KNVTVTRAEV SGDLQHAKVF VSVMGTEKEQ
61 QLTMHGLKSA AGFVQTKLAD RLTSRYVPHV TFVIDEGVKK SIEIARLIRE ENERLTGGQP
121 APEEAEDEAD ESDGDADEGT EPTPESPSAA SEHAAEQGPR AEAAEGTTDR PN
//