LOCUS VTS03480.1 772 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana chemotaxis partial : Globin-coupled
methyl-accepting chemotaxis protein (Modular protein)
OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1:
HAMP: PAS_9: MCPsignal protein.
ACCESSION LR593886-8423
PROTEIN_ID VTS03480.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_71690"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D8PFN9|D8PFN9_9BACT ;
ALN/Q_length_ratio=0.648 ; DESCRIPTION=Globin-coupled
methyl-accepting chemotaxis protein (Modular protein)
OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1 ;
EVALUE=1e-151 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A038GYS9|A0A038GYS9_9BURK ;
ALN/Q_length_ratio=0.582 ; DESCRIPTION=Chemotaxis protein
OS=Burkholderia sp. MP-1 GN=BG58_15470 PE=4 SV=1 ;
EVALUE=1e-150 ; Q/S_length_ratio=1.291"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|H0SRT6|H0SRT6_9BRAD ;
ALN/Q_length_ratio=0.588 ; DESCRIPTION=Putative
methyl-accepting chemotaxis protein (MCP) with multiple
PAS domains OS=Bradyrhizobium sp. ORS 375
GN=BRAO375_800034 PE=4 SV=1 ; EVALUE=1e-148 ;
Q/S_length_ratio=1.485"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Q07SD7|Q07SD7_RHOP5 ;
ALN/Q_length_ratio=0.608 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Rhodopseudomonas palustris (strain BisA53) GN=RPE_1195
PE=4 SV=1 ; EVALUE=1e-144 ; Q/S_length_ratio=0.848"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|Y0KHL8|Y0KHL8_9PROT ;
ALN/Q_length_ratio=0.620 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Methylophilaceae bacterium 11 GN=Meth11DRAFT_1510 PE=4
SV=1 ; EVALUE=1e-144 ; Q/S_length_ratio=0.894"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|G0A6T8|G0A6T8_METMM ;
ALN/Q_length_ratio=0.598 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Methylomonas methanica (strain MC09) GN=Metme_2154 PE=4
SV=1 ; EVALUE=1e-139 ; Q/S_length_ratio=1.055"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A5EDT7|A5EDT7_BRASB ;
ALN/Q_length_ratio=0.619 ; DESCRIPTION=Putative
methyl-accepting chemotaxis protein (MCP) with multiple
PAS domains OS=Bradyrhizobium sp. (strain BTAi1 / ATCC
BAA-1182) GN=BBta_2145 PE=4 SV=1 ; EVALUE=1e-139 ;
Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|F4AI75|F4AI75_GLAS4 ;
ALN/Q_length_ratio=0.575 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Glaciecola sp. (strain 4H-3-7+YE-5) GN=Glaag_2576 PE=4
SV=1 ; EVALUE=1e-138 ; Q/S_length_ratio=0.915"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|K6X5F6|K6X5F6_9ALTE ;
ALN/Q_length_ratio=0.575 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Glaciecola agarilytica NO2 GN=mcp
PE=4 SV=1 ; EVALUE=1e-138 ; Q/S_length_ratio=0.915"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|K6XTZ3|K6XTZ3_9ALTE ;
ALN/Q_length_ratio=0.575 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Glaciecola chathamensis S18K6 GN=mcp
PE=4 SV=1 ; EVALUE=1e-137 ; Q/S_length_ratio=0.915"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A4YP70|A4YP70_BRASO ;
ALN/Q_length_ratio=0.588 ; DESCRIPTION=Putative
methyl-accepting chemotaxis protein (MCP) with multiple
PAS domains OS=Bradyrhizobium sp. (strain ORS278)
GN=BRADO1824 PE=4 SV=1 ; EVALUE=1e-136 ;
Q/S_length_ratio=0.981"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A2P7V9|A2P7V9_VIBCL ;
ALN/Q_length_ratio=0.652 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae 1587 GN=A55_0116
PE=4 SV=1 ; EVALUE=1e-134 ; Q/S_length_ratio=1.171"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|K5KY81|K5KY81_VIBCL ;
ALN/Q_length_ratio=0.652 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae HC-1A2 GN=VCHC1A2_0123 PE=4 SV=1 ;
EVALUE=1e-134 ; Q/S_length_ratio=1.220"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|K5N429|K5N429_VIBCL ;
ALN/Q_length_ratio=0.652 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae HC-61A2 GN=VCHC61A2_0041 PE=4 SV=1 ;
EVALUE=1e-134 ; Q/S_length_ratio=1.220"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|C2C588|C2C588_VIBCL ;
ALN/Q_length_ratio=0.652 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae 12129(1)
GN=VCG_000220 PE=4 SV=1 ; EVALUE=1e-134 ;
Q/S_length_ratio=1.171"
/note="Pfam_scan:hit_1 (11..193);
Pfam:PF12729.2:4HB_MCP_1;
Pfam_type:Family;HMM_aln_Length:180; HMM_Length:181;
EVALUE:5.8e-24; BITSCORE: 84.4"
/note="Pfam_scan:hit_2 (200..269); Pfam:PF00672.20:HAMP;
Pfam_type:Family;HMM_aln_Length:67; HMM_Length:70;
EVALUE:4.3e-13; BITSCORE: 49.2"
/note="Pfam_scan:hit_3 (301..405); Pfam:PF13426.1:PAS_9;
Pfam_type:Domain;HMM_aln_Length:100; HMM_Length:104;
EVALUE:1.3e-15; BITSCORE: 57.6"
/note="Pfam_scan:hit_4 (526..720);
Pfam:PF00015.16:MCPsignal;
Pfam_type:Family;HMM_aln_Length:210; HMM_Length:213;
EVALUE:3.4e-63; BITSCORE: 213.0"
/note="GO_domain:GO:0040011"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0016301"
/note="GO_domain:GO:0004871"
/note="Enzyme_Code:EC:2.7.3"
/note="Enzyme_Code:EC:2.7.13.3"
BEGIN
1 MSNQLADKFN NLGVGTRLIG GFLMLAVACA AVGLWGLRSM TQINSALDNA NGNLLPSVRA
61 LTDLRGNLST VQRAERSILM ATRRKDEAVR NQATGAQETA MVKAREAVKR YEALPMIEKE
121 KKLWAEFLPS MEAFLRDHEA TMGALKGGDL ERAEQACFNS VPNALKMNAQ LNELCDLQGE
181 IGEGDAKDAR EQYASARTTM FVVIGGAALL AVGLGIFFRN LIVNPLNATV KVLQAVASGD
241 LTQKATVTST DEFGQMGAAL NATVQGIHTA LQQDKVNWEV VGQQRAQNAD FAAQIAAIGK
301 AQAVIEFKLD GTVVSANENF QRALGYTLPE IQGRHHSMFV EPAYASSSEY RDFWSRLNRG
361 EPIAAEFKRI GKGGKEIWIQ ASYNPIPDLH GKPFKVVKYA NDITATKDME LKVREDAAAL
421 KQKVAAIMTS VSAIAAGDFT QQAPDLGTDE VGQMAAGLNK AVISVRTALE GVREVSEQLA
481 DASGQLSAAS DEISTGAQEQ ASSLEETAST LEEITATVKQ NSDSAQQARQ LASTSRDIAE
541 KGGQVVGNAV DAMSEINQSS RKIADIITTI DEIAFQTNLL ALNAAVEAAR AGEQGRGFAV
601 VASEVRNLAQ RSATSAKEIK SLIEDSVKKV DAGTELVNQS GSTLGDIVTS VKRVTDIITE
661 IAAAGKEQSV GIEQVNKAVS QMDAVTQKNA SQTEEMSATA QTLTDQAAQL RDLVARFKLS
721 ESGHTASRPA AWSKTPATKP RPAVAKALKN GHANGRKHEL DQLGGDGGFT EF
//