LOCUS VTS03474.1 670 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana chemotaxis protein : Methyl-accepting
chemotaxis sensory transducer OS=Candidatus Methylomirabilis
oxyfera GN=DAMO_1726 PE=4 SV=1: 4HB_MCP_1: HAMP: HAMP:
MCPsignal protein.
ACCESSION LR593886-8421
PROTEIN_ID VTS03474.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_71710"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D5MGA3|D5MGA3_9BACT ;
ALN/Q_length_ratio=0.487 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer OS=Candidatus
Methylomirabilis oxyfera GN=DAMO_1726 PE=4 SV=1 ;
EVALUE=1e-102 ; Q/S_length_ratio=0.961"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|G4E530|G4E530_9GAMM ;
ALN/Q_length_ratio=0.470 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer OS=Thiorhodospira sibirica
ATCC 700588 GN=ThisiDRAFT_1409 PE=4 SV=1 ; EVALUE=1e-101 ;
Q/S_length_ratio=0.920"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D5MGA2|D5MGA2_9BACT ;
ALN/Q_length_ratio=0.467 ; DESCRIPTION=Histidine kinase,
HAMP region:chemotaxis sensory transducer OS=Candidatus
Methylomirabilis oxyfera GN=DAMO_1725 PE=4 SV=1 ;
EVALUE=1e-100 ; Q/S_length_ratio=1.180"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D5MGK2|D5MGK2_9BACT ;
ALN/Q_length_ratio=0.490 ; DESCRIPTION=Putative
Methyl-accepting chemotaxis I (Serine chemoreceptor
protein) transmembrane protein OS=Candidatus
Methylomirabilis oxyfera GN=DAMO_1825 PE=4 SV=1 ;
EVALUE=2e-97 ; Q/S_length_ratio=1.074"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D5MG94|D5MG94_9BACT ;
ALN/Q_length_ratio=0.424 ; DESCRIPTION=Histidine kinase,
HAMP region:chemotaxis sensory transducer OS=Candidatus
Methylomirabilis oxyfera GN=DAMO_1717 PE=4 SV=1 ;
EVALUE=6e-97 ; Q/S_length_ratio=1.169"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|D8PFN9|D8PFN9_9BACT ;
ALN/Q_length_ratio=0.549 ; DESCRIPTION=Globin-coupled
methyl-accepting chemotaxis protein (Modular protein)
OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1 ;
EVALUE=7e-97 ; Q/S_length_ratio=0.868"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Q3SIF3|Q3SIF3_THIDA ;
ALN/Q_length_ratio=0.504 ; DESCRIPTION=Chemotaxis sensory
transducer OS=Thiobacillus denitrificans (strain ATCC
25259) GN=Tbd_1622 PE=4 SV=1 ; EVALUE=6e-96 ;
Q/S_length_ratio=1.171"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|F9ZJI4|F9ZJI4_9PROT ;
ALN/Q_length_ratio=0.518 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer OS=Nitrosomonas sp. AL212
GN=NAL212_0266 PE=4 SV=1 ; EVALUE=3e-95 ;
Q/S_length_ratio=1.171"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|J2LK30|J2LK30_9BURK ;
ALN/Q_length_ratio=0.463 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Herbaspirillum sp. CF444
GN=PMI16_03440 PE=4 SV=1 ; EVALUE=1e-94 ;
Q/S_length_ratio=1.167"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|D8IX44|D8IX44_HERSS ;
ALN/Q_length_ratio=0.473 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer protein OS=Herbaspirillum
seropedicae (strain SmR1) GN=cheD1 PE=4 SV=1 ;
EVALUE=5e-93 ; Q/S_length_ratio=1.182"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A086WFT5|A0A086WFT5_9BURK ;
ALN/Q_length_ratio=0.463 ; DESCRIPTION=Chemotaxis protein
OS=Massilia consociata GN=JN27_02700 PE=4 SV=1 ;
EVALUE=8e-93 ; Q/S_length_ratio=1.175"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F8GGZ3|F8GGZ3_NITSI ;
ALN/Q_length_ratio=0.516 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer OS=Nitrosomonas sp. (strain
Is79A3) GN=Nit79A3_2712 PE=4 SV=1 ; EVALUE=2e-92 ;
Q/S_length_ratio=1.165"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F8GGY8|F8GGY8_NITSI ;
ALN/Q_length_ratio=0.516 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer OS=Nitrosomonas sp. (strain
Is79A3) GN=Nit79A3_2714 PE=4 SV=1 ; EVALUE=2e-92 ;
Q/S_length_ratio=1.167"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|K5KGY7|K5KGY7_VIBCL ;
ALN/Q_length_ratio=0.490 ; DESCRIPTION=HAMP domain protein
OS=Vibrio cholerae CP1035(8) GN=VCCP1035_3627 PE=4 SV=1 ;
EVALUE=3e-92 ; Q/S_length_ratio=1.696"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|C5CXU6|C5CXU6_VARPS ;
ALN/Q_length_ratio=0.461 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer OS=Variovorax paradoxus
(strain S110) GN=Vapar_4189 PE=4 SV=1 ; EVALUE=3e-92 ;
Q/S_length_ratio=1.199"
/note="Pfam_scan:hit_1 (11..193);
Pfam:PF12729.2:4HB_MCP_1;
Pfam_type:Family;HMM_aln_Length:179; HMM_Length:181;
EVALUE:2.3e-17; BITSCORE: 62.9"
/note="Pfam_scan:hit_2 (200..269); Pfam:PF00672.20:HAMP;
Pfam_type:Family;HMM_aln_Length:67; HMM_Length:70;
EVALUE:4.1e-12; BITSCORE: 46.0"
/note="Pfam_scan:hit_3 (314..364); Pfam:PF00672.20:HAMP;
Pfam_type:Family;HMM_aln_Length:42; HMM_Length:70;
EVALUE:1.1e-05; BITSCORE: 25.5"
/note="Pfam_scan:hit_4 (419..617);
Pfam:PF00015.16:MCPsignal;
Pfam_type:Family;HMM_aln_Length:210; HMM_Length:213;
EVALUE:2.3e-64; BITSCORE: 216.8"
/note="GO_domain:GO:0040011"
/note="GO_domain:GO:0005575"
/note="GO_domain:GO:0004871"
BEGIN
1 MPESLLTALM KFRIGPRLIA GFLALAAGAA FLGYTALGAL SQIREFQMNA ATDLVPGLVN
61 LDKIRAGALQ SQRAERGLVL FGQVGDEPNY RSVRANLDAG LKSIEEGLKG YGSSPMTPKE
121 ATNWKDLQAA FADWKRDQED VVACSERREF KKAQDAVARE LKTAARLNQT LQEQIKIQEE
181 TAKEQETQAN STYASARFTL FTTIAVCVVV SIGLGLVLSA SVTGPLGKTV SVLEGVAKGD
241 LSKRAEIDSQ DEVGRLAAAL NTAIAALVAA KEAEHAQVEK DRLRAEREAA EVRERAEREA
301 AETRKRAEHE LARATELQRK IGSVTTSVTA LAAGDFTQEV PNLGTDEVGQ MASALNKAVV
361 SVRTALEGVR EVSEQLADAS GQLSSASDEI STGAQEQASS LEETASTLEE ITATVRQNSD
421 SAQQARQLAS TSRDIAEKGG RVVGNAVEAM SEINQSSKKI ADIITTIDEI AFQTNLLALN
481 AAVEAARAGE QGRGFAVVAS EVRNLAQRSA TAAKEIKSLI EDSVKKVDAG TELVNQSGST
541 LGDIVTSVKR VTDIITEIAA AGKEQSTGIE QVNKAVSQMD SVTQRNASQT EEMSATAQTL
601 TDQASQLRDL IARFKLSEHG HPTPRTTHRT KAPATKPRPA VAKALKSGHA NGNGRKHELD
661 QLGGDGFTEF
//