LOCUS VTS03468.1 671 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana chemotaxis protein : Methyl-accepting
chemotaxis sensory transducer OS=Candidatus Methylomirabilis
oxyfera GN=DAMO_1726 PE=4 SV=1: 4HB_MCP_1: HAMP: MCPsignal
protein.
ACCESSION LR593886-8419
PROTEIN_ID VTS03468.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_71730"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D5MGA3|D5MGA3_9BACT ;
ALN/Q_length_ratio=0.505 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer OS=Candidatus
Methylomirabilis oxyfera GN=DAMO_1726 PE=4 SV=1 ;
EVALUE=2e-97 ; Q/S_length_ratio=0.963"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D5MGA2|D5MGA2_9BACT ;
ALN/Q_length_ratio=0.475 ; DESCRIPTION=Histidine kinase,
HAMP region:chemotaxis sensory transducer OS=Candidatus
Methylomirabilis oxyfera GN=DAMO_1725 PE=4 SV=1 ;
EVALUE=4e-96 ; Q/S_length_ratio=1.181"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|G4E530|G4E530_9GAMM ;
ALN/Q_length_ratio=0.486 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer OS=Thiorhodospira sibirica
ATCC 700588 GN=ThisiDRAFT_1409 PE=4 SV=1 ; EVALUE=2e-95 ;
Q/S_length_ratio=0.922"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D8PFN9|D8PFN9_9BACT ;
ALN/Q_length_ratio=0.548 ; DESCRIPTION=Globin-coupled
methyl-accepting chemotaxis protein (Modular protein)
OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1 ;
EVALUE=6e-95 ; Q/S_length_ratio=0.869"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D5MG94|D5MG94_9BACT ;
ALN/Q_length_ratio=0.463 ; DESCRIPTION=Histidine kinase,
HAMP region:chemotaxis sensory transducer OS=Candidatus
Methylomirabilis oxyfera GN=DAMO_1717 PE=4 SV=1 ;
EVALUE=2e-94 ; Q/S_length_ratio=1.171"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|D5MGK2|D5MGK2_9BACT ;
ALN/Q_length_ratio=0.487 ; DESCRIPTION=Putative
Methyl-accepting chemotaxis I (Serine chemoreceptor
protein) transmembrane protein OS=Candidatus
Methylomirabilis oxyfera GN=DAMO_1825 PE=4 SV=1 ;
EVALUE=3e-94 ; Q/S_length_ratio=1.075"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|M7P1D5|M7P1D5_9GAMM ;
ALN/Q_length_ratio=0.499 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Methylophaga lonarensis MPL
GN=MPL1_06139 PE=3 SV=1 ; EVALUE=3e-92 ;
Q/S_length_ratio=0.826"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|Q3SIF3|Q3SIF3_THIDA ;
ALN/Q_length_ratio=0.504 ; DESCRIPTION=Chemotaxis sensory
transducer OS=Thiobacillus denitrificans (strain ATCC
25259) GN=Tbd_1622 PE=4 SV=1 ; EVALUE=4e-92 ;
Q/S_length_ratio=1.173"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|Q3SIF6|Q3SIF6_THIDA ;
ALN/Q_length_ratio=0.502 ; DESCRIPTION=Chemotaxis sensory
transducer OS=Thiobacillus denitrificans (strain ATCC
25259) GN=Tbd_1619 PE=4 SV=1 ; EVALUE=2e-91 ;
Q/S_length_ratio=1.200"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|I2IQ28|I2IQ28_9BURK ;
ALN/Q_length_ratio=0.456 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Burkholderia sp. Ch1-1
GN=BCh11DRAFT_00568 PE=4 SV=1 ; EVALUE=7e-91 ;
Q/S_length_ratio=1.105"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|Q3SL08|Q3SL08_THIDA ;
ALN/Q_length_ratio=0.487 ; DESCRIPTION=Chemotaxis sensory
transducer OS=Thiobacillus denitrificans (strain ATCC
25259) GN=Tbd_0660 PE=4 SV=1 ; EVALUE=1e-90 ;
Q/S_length_ratio=1.145"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|I2DVZ9|I2DVZ9_9BURK ;
ALN/Q_length_ratio=0.466 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Burkholderia sp. KJ006 GN=MYA_4471
PE=4 SV=1 ; EVALUE=1e-89 ; Q/S_length_ratio=1.264"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|I4WBL3|I4WBL3_9GAMM ;
ALN/Q_length_ratio=0.399 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Rhodanobacter thiooxydans LCS2
GN=UUA_16815 PE=4 SV=1 ; EVALUE=1e-89 ;
Q/S_length_ratio=1.169"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|D8IX44|D8IX44_HERSS ;
ALN/Q_length_ratio=0.477 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer protein OS=Herbaspirillum
seropedicae (strain SmR1) GN=cheD1 PE=4 SV=1 ;
EVALUE=1e-89 ; Q/S_length_ratio=1.183"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A089C558|A0A089C558_9BURK ;
ALN/Q_length_ratio=0.455 ; DESCRIPTION=Methyl-accepting
chemotaxis (MCP) signaling domain protein OS=Burkholderia
xenovorans GN=DR64_5016 PE=4 SV=1 ; EVALUE=4e-89 ;
Q/S_length_ratio=1.157"
/note="Pfam_scan:hit_1 (11..193);
Pfam:PF12729.2:4HB_MCP_1;
Pfam_type:Family;HMM_aln_Length:177; HMM_Length:181;
EVALUE:1.1e-13; BITSCORE: 50.9"
/note="Pfam_scan:hit_2 (200..269); Pfam:PF00672.20:HAMP;
Pfam_type:Family;HMM_aln_Length:67; HMM_Length:70;
EVALUE:1.4e-10; BITSCORE: 41.2"
/note="Pfam_scan:hit_3 (416..617);
Pfam:PF00015.16:MCPsignal;
Pfam_type:Family;HMM_aln_Length:210; HMM_Length:213;
EVALUE:2.8e-63; BITSCORE: 213.3"
/note="GO_domain:GO:0040011"
/note="GO_domain:GO:0005575"
/note="GO_domain:GO:0004871"
BEGIN
1 MLQSVIAVLM KVRIGPRLIA GFLLIASGCA FLGYEALGAL SEIRTYQVNA ATNLVPSIIN
61 LDKARTGALR IQRGERTMIA YGLKGDEQGA RTAREHVGIG WASTNEGLKG YGSLPMIEKE
121 AVIWKQLQTA LTEWKRDHEE IMGLADRREY DKAADAAFRE LKTANRMNEV LQDLIGVQEE
181 IARDEETRAN GTYASARGTL WGTIAGTVFV AVGLGLVLSA SVTGPLGQTV AILEGVAKGD
241 LSKRAEIDSQ DEVGRLAAAL NTAIAALVAA KEAERAQVEK DRLRVEREAT ETRERVEREA
301 AANRAQAELE RAQAAELQQK VATITATVSA LAAGNFTQEV PDLGDDTVGQ MAVALNAAVA
361 SVRTALEGVR EVSEQLAEAS SQLSNASDEI STGAQEQASS LEETASTLEE ITATVRQNSD
421 SAQQARQLAS TSRDIAEKGG RVVGNAVEAM SEINQSSKKI ADIITTIDEI AFQTNLLALN
481 AAVEAARAGE QGRGFAVVAS EVRNLAQRSA TSAKEIKALI EDSVKKVDAG TELVNQSGST
541 LGDIVTSVKR VTDIITEIAA AGKEQSVGIE QVNKAVSQMD SVTQRNASQT EEVSATAQAL
601 TDQAGQLRDL VARFQLGNDG RTAARAPAPR AKAASKKPRP AVARAMSSGH SNGRGHELDR
661 LGGDSGGFTE F
//