LOCUS VTS03459.1 482 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana Putative regulatory subunit (Fragment)
OS=Gemmata sp. Wa1-1 PE=4 SV=1: LRR_6: LRR_6: LRR_6 protein.
ACCESSION LR593886-8416
PROTEIN_ID VTS03459.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_71760"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|Q5EUH2|Q5EUH2_9PLAN ;
ALN/Q_length_ratio=0.747 ; DESCRIPTION=Putative regulatory
subunit (Fragment) OS=Gemmata sp. Wa1-1 PE=4 SV=1 ;
EVALUE=4e-40 ; Q/S_length_ratio=0.876"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A068UPL3|A0A068UPL3_COFCA ;
ALN/Q_length_ratio=0.892 ; DESCRIPTION=Coffea canephora
DH200=94 genomic scaffold, scaffold_45 OS=Coffea canephora
GN=GSCOC_T00031235001 PE=4 SV=1 ; EVALUE=8e-32 ;
Q/S_length_ratio=0.832"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A0A090KN24|A0A090KN24_9BACT ;
ALN/Q_length_ratio=0.751 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=1e-31 ;
Q/S_length_ratio=0.954"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A6C6U2|A6C6U2_9PLAN ;
ALN/Q_length_ratio=0.741 ; DESCRIPTION=Leucine-rich repeat
domain protein OS=Planctomyces maris DSM 8797
GN=PM8797T_24876 PE=4 SV=1 ; EVALUE=2e-29 ;
Q/S_length_ratio=0.974"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|U5D1Q2|U5D1Q2_AMBTC ;
ALN/Q_length_ratio=0.749 ; DESCRIPTION=Uncharacterized
protein OS=Amborella trichopoda GN=AMTR_s00033p00180120
PE=4 SV=1 ; EVALUE=6e-29 ; Q/S_length_ratio=0.834"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A6C938|A6C938_9PLAN ;
ALN/Q_length_ratio=0.624 ; DESCRIPTION=Leucine-rich repeat
domain protein OS=Planctomyces maris DSM 8797
GN=PM8797T_14711 PE=4 SV=1 ; EVALUE=7e-28 ;
Q/S_length_ratio=0.381"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F0SP32|F0SP32_PLABD ;
ALN/Q_length_ratio=0.716 ; DESCRIPTION=Leucine-rich
repeat-containing protein OS=Planctomyces brasiliensis
(strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 /
IFAM 1448) GN=Plabr_3538 PE=4 SV=1 ; EVALUE=1e-27 ;
Q/S_length_ratio=1.069"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|X0TGY3|X0TGY3_9ZZZZ ;
ALN/Q_length_ratio=0.550 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_S00874 (Fragment) OS=marine
sediment metagenome GN=S01H1_25862 PE=4 SV=1 ;
EVALUE=1e-27 ; Q/S_length_ratio=1.703"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A6C325|A6C325_9PLAN ;
ALN/Q_length_ratio=0.774 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_09949
PE=4 SV=1 ; EVALUE=3e-27 ; Q/S_length_ratio=0.893"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A067EM50|A0A067EM50_CITSI ;
ALN/Q_length_ratio=0.734 ; DESCRIPTION=Uncharacterized
protein OS=Citrus sinensis GN=CISIN_1g009672mg PE=4 SV=1 ;
EVALUE=7e-27 ; Q/S_length_ratio=1.021"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|G7JGL8|G7JGL8_MEDTR ;
ALN/Q_length_ratio=0.749 ; DESCRIPTION=F-box/LRR-like
protein OS=Medicago truncatula GN=MTR_4g116170 PE=4 SV=1 ;
EVALUE=1e-26 ; Q/S_length_ratio=0.837"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M5VVI8|M5VVI8_PRUPE ;
ALN/Q_length_ratio=0.720 ; DESCRIPTION=Uncharacterized
protein OS=Prunus persica GN=PRUPE_ppa003392mg PE=4 SV=1 ;
EVALUE=1e-26 ; Q/S_length_ratio=0.834"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A067EEH2|A0A067EEH2_CITSI ;
ALN/Q_length_ratio=0.749 ; DESCRIPTION=Uncharacterized
protein OS=Citrus sinensis GN=CISIN_1g009672mg PE=4 SV=1 ;
EVALUE=2e-26 ; Q/S_length_ratio=0.970"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|B9HAJ1|B9HAJ1_POPTR ;
ALN/Q_length_ratio=0.747 ; DESCRIPTION=Leucine-rich repeat
family protein OS=Populus trichocarpa GN=POPTR_0006s06040g
PE=4 SV=2 ; EVALUE=3e-26 ; Q/S_length_ratio=0.820"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A067EMY7|A0A067EMY7_CITSI ;
ALN/Q_length_ratio=0.749 ; DESCRIPTION=Uncharacterized
protein OS=Citrus sinensis GN=CISIN_1g009672mg PE=4 SV=1 ;
EVALUE=3e-26 ; Q/S_length_ratio=0.958"
/note="Pfam_scan:hit_1 (256..278); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:21; HMM_Length:24;
EVALUE:0.32; BITSCORE: 11.1"
/note="Pfam_scan:hit_2 (280..303); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:22; HMM_Length:24;
EVALUE:0.18; BITSCORE: 11.9"
/note="Pfam_scan:hit_3 (400..446); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:19; HMM_Length:24;
EVALUE:1; BITSCORE: 9.6"
BEGIN
1 MRADQSLPVV ALGLVVLVGC GAKESTSSPQ DHPAIPLKND PSVVALPKGQ QPIAPIVPLP
61 EQVSVTDADK AKLDELQKQG ASVFGPQANG GYIVGIGRDT SAAVLVPLLK GLKCVIELSI
121 ENDALTDESV QHLDGIEYLE RLSLLRCVNV SGTNFGVLAK LPRLKVLAFV ECPLTDAACK
181 PIGRCRKLEE VAFNSSRITD TGLRELSGVP ELVSISLYST PVTGTAFAAP GWAKLRFIEA
241 PNSHFDDTGL EATVGLPALE TLDIRATKVT DAGAKYFDRA KKLVDLNLSQ TAVGDVGLGA
301 IGKLPALKEL HLEETKATDL GVAALGAVRT LRVLNLEKTA VTGTAFAKFA QPSVLRKLNL
361 NGTKFNDAGG AHLTRFTALT NLSLTACPVT DVGLTALGAL KKLTNLDLSG TKAGDGAAKL
421 VGTLPELEIA SFNETPLTDA GLKDAARGAG LKFLYARDTK VTKRGVIEAG TFARPGVKID
481 AG
//