LOCUS VTS03432.1 666 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana two sigma54 fis family transcriptional
regulator : Sigma54 specific transcriptional regulator,
Fis family OS=Pirellula staleyi (strain ATCC 27377 / DSM
6068 / ICPB 4128) GN=Psta_4161 PE=4 SV=1: FHA: GAF_2:
Sigma54_activat: HTH_8 protein.
ACCESSION LR593886-8407
PROTEIN_ID VTS03432.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_71850"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D2R3W1|D2R3W1_PIRSD ;
ALN/Q_length_ratio=0.875 ; DESCRIPTION=Sigma54 specific
transcriptional regulator, Fis family OS=Pirellula staleyi
(strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_4161
PE=4 SV=1 ; EVALUE=1e-119 ; Q/S_length_ratio=1.090"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A3ZZQ6|A3ZZQ6_9PLAN ;
ALN/Q_length_ratio=0.877 ; DESCRIPTION=Nitrogen fixation
protein anfA (Sigma-54 dependendent transcription
regulator) OS=Blastopirellula marina DSM 3645
GN=DSM3645_16050 PE=4 SV=1 ; EVALUE=1e-117 ;
Q/S_length_ratio=1.088"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|M5S7F3|M5S7F3_9PLAN ;
ALN/Q_length_ratio=0.898 ; DESCRIPTION=Two component,
sigma54 specific, Fis family transcriptional regulator
OS=Rhodopirellula europaea SH398 GN=RESH_02039 PE=4 SV=1 ;
EVALUE=1e-104 ; Q/S_length_ratio=1.108"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|K5DHA5|K5DHA5_RHOBT ;
ALN/Q_length_ratio=0.898 ; DESCRIPTION=Two component,
sigma54 specific, Fis family transcriptional regulator
OS=Rhodopirellula baltica SH28 GN=RBSH_02550 PE=4 SV=1 ;
EVALUE=1e-103 ; Q/S_length_ratio=1.108"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|M2AFG6|M2AFG6_9PLAN ;
ALN/Q_length_ratio=0.898 ; DESCRIPTION=Two component,
sigma54 specific, Fis family transcriptional regulator
OS=Rhodopirellula europaea 6C GN=RE6C_03464 PE=4 SV=1 ;
EVALUE=1e-103 ; Q/S_length_ratio=1.108"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F2AMY6|F2AMY6_RHOBT ;
ALN/Q_length_ratio=0.898 ; DESCRIPTION=Two component,
sigma54 specific, Fis family transcriptional regulator
OS=Rhodopirellula baltica WH47 GN=RBWH47_01283 PE=4 SV=1 ;
EVALUE=1e-103 ; Q/S_length_ratio=1.108"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L7CFA4|L7CFA4_RHOBT ;
ALN/Q_length_ratio=0.898 ; DESCRIPTION=Two component,
sigma54 specific, Fis family transcriptional regulator
OS=Rhodopirellula baltica SWK14 GN=RBSWK_03991 PE=4 SV=1 ;
EVALUE=1e-103 ; Q/S_length_ratio=1.108"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|Q7U393|Q7U393_RHOBA ;
ALN/Q_length_ratio=0.898 ; DESCRIPTION=Nitrogen fixation
protein anfA (Sigma-54 dependendent transcription
regulator) OS=Rhodopirellula baltica (strain SH1)
GN=RB8745 PE=4 SV=1 ; EVALUE=1e-102 ;
Q/S_length_ratio=1.069"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M5TUH0|M5TUH0_9PLAN ;
ALN/Q_length_ratio=0.904 ; DESCRIPTION=Two component,
sigma54 specific, Fis family transcriptional regulator
OS=Rhodopirellula sallentina SM41 GN=RSSM_05757 PE=4 SV=1
; EVALUE=1e-102 ; Q/S_length_ratio=1.104"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5RNS7|M5RNS7_9PLAN ;
ALN/Q_length_ratio=0.913 ; DESCRIPTION=Protein containing
RNA polymerase sigma factor 54, interaction
OS=Rhodopirellula maiorica SM1 GN=RMSM_02089 PE=4 SV=1 ;
EVALUE=1e-101 ; Q/S_length_ratio=1.069"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M5TDD8|M5TDD8_9PLAN ;
ALN/Q_length_ratio=0.904 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Rhodopirellula sp. SWK7 GN=RRSWK_05578 PE=4 SV=1 ;
EVALUE=1e-100 ; Q/S_length_ratio=1.104"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F0SSP2|F0SSP2_PLABD ;
ALN/Q_length_ratio=0.950 ; DESCRIPTION=Sigma54 specific
transcriptional regulator, Fis family OS=Planctomyces
brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /
NBRC 103401 / IFAM 1448) GN=Plabr_2759 PE=4 SV=1 ;
EVALUE=1e-98 ; Q/S_length_ratio=0.990"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|D2QZ64|D2QZ64_PIRSD ;
ALN/Q_length_ratio=1.002 ; DESCRIPTION=Transcriptional
regulator, NifA subfamily, Fis Family OS=Pirellula staleyi
(strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_3595
PE=4 SV=1 ; EVALUE=2e-97 ; Q/S_length_ratio=0.984"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A4A0U9|A4A0U9_9PLAN ;
ALN/Q_length_ratio=1.006 ; DESCRIPTION=Ornithine
decarboxylase inhibitor-putative sigma54 transciptional
regulator OS=Blastopirellula marina DSM 3645
GN=DSM3645_24812 PE=4 SV=1 ; EVALUE=7e-94 ;
Q/S_length_ratio=0.981"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A6CG13|A6CG13_9PLAN ;
ALN/Q_length_ratio=0.854 ; DESCRIPTION=Ornithine
decarboxylase inhibitor-putative sigma54 transciptional
regulator (Fragment) OS=Planctomyces maris DSM 8797
GN=PM8797T_17439 PE=4 SV=1 ; EVALUE=1e-93 ;
Q/S_length_ratio=1.103"
/note="Pfam_scan:hit_1 (26..89); Pfam:PF00498.21:FHA;
Pfam_type:Family;HMM_aln_Length:67; HMM_Length:68;
EVALUE:6.3e-15; BITSCORE: 55.0"
/note="Pfam_scan:hit_2 (169..299); Pfam:PF13185.1:GAF_2;
Pfam_type:Domain;HMM_aln_Length:146; HMM_Length:148;
EVALUE:2.5e-07; BITSCORE: 31.3"
/note="Pfam_scan:hit_3 (324..491);
Pfam:PF00158.21:Sigma54_activat;
Pfam_type:Domain;HMM_aln_Length:166; HMM_Length:168;
EVALUE:1.4e-64; BITSCORE: 216.5"
/note="Pfam_scan:hit_4 (592..633); Pfam:PF02954.14:HTH_8;
Pfam_type:Domain;HMM_aln_Length:40; HMM_Length:42;
EVALUE:2.5e-11; BITSCORE: 42.9"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0008134"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MRARLTLEGG ECVPPTLDLS PSGQPVTLGR SRDNTVVLRD EMASRTHAKI YFEDGRWHVR
61 DFGLNGTRVD GHRVNGAVEL SDGQRVKIGE VVLKFVLEPK SPPKPVKDAP ATMPNIKTVN
121 EGPHNATKVH ELPLDRLLPN DLPPDQTAKQ LRVDELTALC KFMTGAVETK TPHDLIGFAL
181 RSILNQTAAK LAGYLSLDPE DPGPKIVMPE SAAIDIPLSR RLTAQAQKNG KTIWLFPDLS
241 AAHPPTDSLS SFADAICIPL KASGEPFATL HVYRSGRAFV ERDVRFIEAV AGFLAHGLEI
301 LRTRRTLEAE NSRLRTHTPA ADDIIGGSNA VIHLRQQILR AAPQPFTVLV QGESGSGKEL
361 VALALHRNSR RAEGPLVVVN CAAIAPTLLE AELFGYKKGA FSGADRDHPG LFQQADEGTL
421 FLDEVGELSL ECQAKLLRVI EGKAFRPVGA TGDIKADVRI VAATHRDLEK EVKAGRFRQD
481 LMFRLKVIPI RVPPLREHPE DIPELAAFFL AKVSSECRRK FKLTAAAMRK LQAYPWPGNV
541 RQLRAAIESA AVMSEGDTIE ADAIPLTGTT ELVAAPTVTS GATAPDLPPS LDMSEIETWA
601 ICRAMKQTNG NVSHAAKLLN ISRDTLHTKL KKLEEKGINR HSLLAGNTAV TPAPIATPEP
661 LSATEV
//