LOCUS VTS03373.1 903 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana pas domain s-box : Histidine kinase
OS=delta proteobacterium MLMS-1 GN=MldDRAFT_0990 PE=4
SV=1: PAS_4: PAS_3: PAS_9: HisKA: HATPase_c: Response_reg:
Hpt protein.
ACCESSION LR593886-8387
PROTEIN_ID VTS03373.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_72050"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|Q1NWB6|Q1NWB6_9DELT ;
ALN/Q_length_ratio=0.764 ; DESCRIPTION=Histidine kinase
OS=delta proteobacterium MLMS-1 GN=MldDRAFT_0990 PE=4 SV=1
; EVALUE=1e-130 ; Q/S_length_ratio=0.861"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|G8QGA3|G8QGA3_AZOSU ;
ALN/Q_length_ratio=0.739 ; DESCRIPTION=PAS domain S-box
OS=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS)
GN=Dsui_2885 PE=4 SV=1 ; EVALUE=1e-128 ;
Q/S_length_ratio=0.862"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|M5PS91|M5PS91_DESAF ;
ALN/Q_length_ratio=0.580 ; DESCRIPTION=PAS domain S-box
OS=Desulfovibrio africanus PCS GN=PCS_02350 PE=4 SV=1 ;
EVALUE=1e-127 ; Q/S_length_ratio=1.618"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|F3Z1W5|F3Z1W5_DESAF ;
ALN/Q_length_ratio=0.580 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Desulfovibrio africanus str.
Walvis Bay GN=Desaf_1737 PE=4 SV=1 ; EVALUE=1e-126 ;
Q/S_length_ratio=1.618"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D5MGF7|D5MGF7_9BACT ;
ALN/Q_length_ratio=0.631 ; DESCRIPTION=Sensor protein
OS=Candidatus Methylomirabilis oxyfera GN=DAMO_1780 PE=4
SV=1 ; EVALUE=1e-126 ; Q/S_length_ratio=1.322"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|F3YZW0|F3YZW0_DESAF ;
ALN/Q_length_ratio=0.588 ; DESCRIPTION=Histidine kinase
OS=Desulfovibrio africanus str. Walvis Bay GN=Desaf_2596
PE=4 SV=1 ; EVALUE=1e-125 ; Q/S_length_ratio=1.026"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Q74AN8|Q74AN8_GEOSL ;
ALN/Q_length_ratio=0.708 ; DESCRIPTION=Sensor histidine
kinase response regulator, DUF3365, PAS, PAS and Hpt
domain-containing, heme-binding OS=Geobacter
sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
GN=GSU2314 PE=4 SV=2 ; EVALUE=1e-123 ;
Q/S_length_ratio=0.881"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|D7AMD5|D7AMD5_GEOSK ;
ALN/Q_length_ratio=0.708 ; DESCRIPTION=Sensor histidine
kinase response regulator, DUF3365, PAS, PAS and Hpt
domain-containing, heme-binding OS=Geobacter
sulfurreducens (strain DL-1 / KN400) GN=KN400_2260 PE=4
SV=2 ; EVALUE=1e-123 ; Q/S_length_ratio=0.881"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|S7U443|S7U443_9DELT ;
ALN/Q_length_ratio=0.635 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Desulfovibrio sp. X2
GN=dsx2_1841 PE=4 SV=1 ; EVALUE=1e-122 ;
Q/S_length_ratio=1.171"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|S7T4Y9|S7T4Y9_9DELT ;
ALN/Q_length_ratio=0.662 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Desulfovibrio alkalitolerans
DSM 16529 GN=dsat_0889 PE=4 SV=1 ; EVALUE=1e-116 ;
Q/S_length_ratio=1.136"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|F3YUV1|F3YUV1_DESAF ;
ALN/Q_length_ratio=0.577 ; DESCRIPTION=Multi-sensor hybrid
histidine kinase OS=Desulfovibrio africanus str. Walvis
Bay GN=Desaf_0777 PE=4 SV=1 ; EVALUE=1e-116 ;
Q/S_length_ratio=0.733"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|W4LA90|W4LA90_9DELT ;
ALN/Q_length_ratio=0.439 ; DESCRIPTION=Uncharacterized
protein OS=Candidatus Entotheonella sp. TSY1
GN=ETSY1_35730 PE=4 SV=1 ; EVALUE=1e-115 ;
Q/S_length_ratio=1.366"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M5PTW2|M5PTW2_DESAF ;
ALN/Q_length_ratio=0.578 ; DESCRIPTION=PAS domain S-box
OS=Desulfovibrio africanus PCS GN=PCS_01790 PE=4 SV=1 ;
EVALUE=1e-115 ; Q/S_length_ratio=0.733"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M5PPA4|M5PPA4_DESAF ;
ALN/Q_length_ratio=0.685 ; DESCRIPTION=PAS domain S-box
OS=Desulfovibrio africanus PCS GN=PCS_03287 PE=4 SV=1 ;
EVALUE=1e-114 ; Q/S_length_ratio=1.109"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|F4BSW7|F4BSW7_METCG ;
ALN/Q_length_ratio=0.845 ; DESCRIPTION=Multi-sensor hybrid
histidine kinase OS=Methanosaeta concilii (strain ATCC
5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6)
GN=MCON_1408 PE=4 SV=1 ; EVALUE=1e-113 ;
Q/S_length_ratio=0.828"
/note="Pfam_scan:hit_1 (10..111); Pfam:PF08448.5:PAS_4;
Pfam_type:Domain;HMM_aln_Length:109; HMM_Length:110;
EVALUE:4.8e-06; BITSCORE: 26.5"
/note="Pfam_scan:hit_2 (162..246); Pfam:PF08447.6:PAS_3;
Pfam_type:Domain;HMM_aln_Length:72; HMM_Length:91;
EVALUE:5e-13; BITSCORE: 48.9"
/note="Pfam_scan:hit_3 (278..385); Pfam:PF13426.1:PAS_9;
Pfam_type:Domain;HMM_aln_Length:101; HMM_Length:104;
EVALUE:1.7e-11; BITSCORE: 44.3"
/note="Pfam_scan:hit_4 (406..471); Pfam:PF00512.20:HisKA;
Pfam_type:Domain;HMM_aln_Length:67; HMM_Length:68;
EVALUE:1.2e-19; BITSCORE: 70.0"
/note="Pfam_scan:hit_5 (518..632);
Pfam:PF02518.21:HATPase_c;
Pfam_type:Domain;HMM_aln_Length:109; HMM_Length:111;
EVALUE:2e-27; BITSCORE: 95.0"
/note="Pfam_scan:hit_6 (659..774);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:110; HMM_Length:112;
EVALUE:1.7e-27; BITSCORE: 95.5"
/note="Pfam_scan:hit_7 (811..893); Pfam:PF01627.18:Hpt;
Pfam_type:Family;HMM_aln_Length:88; HMM_Length:90;
EVALUE:5.3e-06; BITSCORE: 26.3"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0016301"
/note="GO_domain:GO:0004871"
/note="Enzyme_Code:EC:2.7.3"
/note="Enzyme_Code:EC:2.7.13.3"
BEGIN
1 MTDAAFRVLV EHAADLLVVT DAAGVIRYVS PSARRLGYSG AWTGRRVEEV VHPDDRFALT
61 AALATATPVE CRLPLVSGAW RFVEAVAADL RADPVVGGLM IDFRDVTDRK RAEEQLRALN
121 DDLERRVAER TAEVAAAHTV TSSIPGVVYR MRIDIPTRRV FHDFVSEGIR ELAGIAPEDA
181 LGDATGFIEL IYPDDRPRME ALLMAAIQTG TATDVEYRLR HSDGHLKWVR GRLKLSSTTP
241 DGWLVFDGFA HDITSQKETE RQLRENDAKF RALFEGTSAG VILVDAERDQ IVDCNEALLG
301 MLRCRREDVV GQPAARFRAP IQAGGVPVAE LRARVAEQVT RQGGLHEELS LRRPDGTEFQ
361 AEVVISPFRL DGRLMALGVA TDVSGRKRAE EALRQAAQAA EAASRAKSEF LAHMSHEIRT
421 PMNGIIGLTA LALDGNPPPE QREYLELVRS SADALLATLN DLLDLSKIEA GKLDLDCTPF
481 ALRRLLDESL RAFAVQARGK GLEFACHVEP DVPDTLSGDP HRLRQILTNL AANAIKFTER
541 GGVSVRIEPV PDDGRVGLRF TVRDTGIGIP TDKQEHVFRA FEQADNSTTR RYGGTGLGLT
601 IAGRLSALMG GQIGVHSTPG FGSTFFFTVR LDRATESVSE PPTACATSAP NRTGRRLQIL
661 VAEDHEVNQI LTRRLLERAG HEVVLVDNGR AALDALRGRE FDLALLDIQM PELDGLEVVR
721 HLREHEREHK LPRRPVLALT AFSMKGDRER CLTVGMDGYL SKPIRAAELY AALDRCATSR
781 PAVTTTAPAT ELLDRPTILA ACAGDQELLD EITQVFRDRA PTLLGAVRDA VERGDADKLT
841 RSAHACKGVT ATFSSIAAAT ARKLEHQGHA KDLTGASELC SELAGQLEQI ARELVGLRVG
901 TLR
//