LOCUS VTS03370.1 485 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana response regulator with -like aaa-type
and dna-binding domains : Response regulator with CheY-
like receiver, AAA-type ATPase, and DNA-binding domains
OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=Sinac_7189 PE=4 SV=1: Response_reg:
Sigma54_activat: HTH_8 protein.
ACCESSION LR593886-8386
PROTEIN_ID VTS03370.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_72060"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0D8V2|L0D8V2_SINAD ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1278 PE=4 SV=1
; EVALUE=0.0 ; Q/S_length_ratio=1.010"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0DAX5|L0DAX5_SINAD ;
ALN/Q_length_ratio=0.928 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2216 PE=4 SV=1
; EVALUE=0.0 ; Q/S_length_ratio=1.039"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DPR2|L0DPR2_SINAD ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7189 PE=4 SV=1
; EVALUE=0.0 ; Q/S_length_ratio=1.010"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|L0D954|L0D954_SINAD ;
ALN/Q_length_ratio=0.996 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0782 PE=4 SV=1
; EVALUE=1e-178 ; Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|M5RVU1|M5RVU1_9PLAN ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Rhodopirellula maiorica SM1 GN=RMSM_03548 PE=4 SV=1 ;
EVALUE=1e-175 ; Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M5T5I6|M5T5I6_9PLAN ;
ALN/Q_length_ratio=0.948 ; DESCRIPTION=Two component,
sigma54 specific, Fis family transcriptional regulator
OS=Rhodopirellula sp. SWK7 GN=RRSWK_06777 PE=4 SV=1 ;
EVALUE=1e-174 ; Q/S_length_ratio=1.034"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A6CBD4|A6CBD4_9PLAN ;
ALN/Q_length_ratio=0.996 ; DESCRIPTION=Nitrogen
assimilation regulatory protein OS=Planctomyces maris DSM
8797 GN=PM8797T_15566 PE=4 SV=1 ; EVALUE=1e-168 ;
Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|F0SK36|F0SK36_PLABD ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305
/ JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_2160 PE=4
SV=1 ; EVALUE=1e-163 ; Q/S_length_ratio=0.998"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A3ZS60|A3ZS60_9PLAN ;
ALN/Q_length_ratio=0.981 ; DESCRIPTION=Nitrogen
assimilation regulatory protein OS=Blastopirellula marina
DSM 3645 GN=DSM3645_14270 PE=4 SV=1 ; EVALUE=1e-157 ;
Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5RS05|M5RS05_9PLAN ;
ALN/Q_length_ratio=1.004 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Rhodopirellula maiorica SM1 GN=RMSM_00953 PE=4 SV=1 ;
EVALUE=1e-152 ; Q/S_length_ratio=0.872"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M5RKN9|M5RKN9_9PLAN ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=Two component
sigma54 specific Fis family transcriptional regulator
OS=Rhodopirellula maiorica SM1 GN=RMSM_07141 PE=4 SV=1 ;
EVALUE=1e-151 ; Q/S_length_ratio=0.998"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M5T1H3|M5T1H3_9PLAN ;
ALN/Q_length_ratio=1.039 ; DESCRIPTION=Transcriptional
regulatory protein ZraR OS=Rhodopirellula sp. SWK7
GN=RRSWK_04588 PE=4 SV=1 ; EVALUE=1e-150 ;
Q/S_length_ratio=0.877"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|F2B0C5|F2B0C5_RHOBT ;
ALN/Q_length_ratio=0.973 ; DESCRIPTION=Nitrogen regulation
protein NR(I) OS=Rhodopirellula baltica WH47
GN=RBWH47_00006 PE=4 SV=1 ; EVALUE=1e-147 ;
Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|L7CDR0|L7CDR0_RHOBT ;
ALN/Q_length_ratio=0.973 ; DESCRIPTION=Two component,
sigma54 specific, Fis family transcriptional regulator
OS=Rhodopirellula baltica SWK14 GN=RBSWK_03668 PE=4 SV=1 ;
EVALUE=1e-147 ; Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|Q7UE04|Q7UE04_RHOBA ;
ALN/Q_length_ratio=0.973 ; DESCRIPTION=Cetoacetate
metabolism regulatory protein atoC OS=Rhodopirellula
baltica (strain SH1) GN=atoC PE=4 SV=1 ; EVALUE=1e-146 ;
Q/S_length_ratio=1.008"
/note="Pfam_scan:hit_1 (4..115);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:109; HMM_Length:112;
EVALUE:1.2e-22; BITSCORE: 79.9"
/note="Pfam_scan:hit_2 (143..310);
Pfam:PF00158.21:Sigma54_activat;
Pfam_type:Domain;HMM_aln_Length:166; HMM_Length:168;
EVALUE:6.9e-71; BITSCORE: 237.1"
/note="Pfam_scan:hit_3 (424..465); Pfam:PF02954.14:HTH_8;
Pfam_type:Domain;HMM_aln_Length:39; HMM_Length:42;
EVALUE:1.3e-11; BITSCORE: 43.8"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0007165"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0008134"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MPRVLMIDDE PELLQKLVRH ALRDGPAELL VARSATEGLA LAANAPPDVV LLDMHLPDGT
61 GLDVFRRLRA ADRRTPVVFI TGSAGTDTAI EAMKEGAFDY LFKPVELEQL KRVVAQALEV
121 SRLVRQPAIL ADTLPTDDRT DAIIGRCPAM REVYKAVGRV ADQNVAVLIT GESGTGKEVI
181 ARAIYQHGRR ATGPFLALNC AAIPENLLES ELFGHEKGAF TGADRRRIGR FEQAHGGTIF
241 LDEIGDMPLA TQAKMLRVLQ DQAFERVGGN ETISTDVRVL AATNRDLPEM VARGLFRGDL
301 YYRLGVFTVA LPPLRERGDD LPLLVRHYLG RYSRELGREV RDAAPDALEI LRAYPWPGNV
361 RELQSVLKQA LLLARGELLL PAFLPGSLRA SVPATGSPVG DKFELEAFVR ERLEGGSRGL
421 YAETVSAVER VLLPLVLKHT GGNQVQAAEV LGITRKTLRA RLRELGLTVT RAVERVADDD
481 TDPGD
//