LOCUS VTS03195.1 681 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana nad-dependent dna ligase : DNA ligase
OS=uncultured bacterium GN=ligA PE=3 SV=1: DNA_ligase_aden:
DNA_ligase_OB: HHH_2: BRCT protein.
ACCESSION LR593886-8328
PROTEIN_ID VTS03195.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_72640"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|F6CR27|F6CR27_DESK7 ;
ALN/Q_length_ratio=0.963 ; DESCRIPTION=DNA ligase
OS=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM
B-1805 / 17) GN=ligA PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D2R1J9|D2R1J9_PIRSD ;
ALN/Q_length_ratio=0.963 ; DESCRIPTION=DNA ligase
OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB
4128) GN=ligA PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_12 ; ACCESSION=A4J703 ;
ALN/Q_length_ratio=0.965 ; DESCRIPTION=DNA ligase
OS=Desulfotomaculum reducens (strain MI-1) GN=ligA PE=3
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.016"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A1HME7|A1HME7_9FIRM ;
ALN/Q_length_ratio=0.971 ; DESCRIPTION=DNA ligase
OS=Thermosinus carboxydivorans Nor1 GN=ligA PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A3ZSW5|A3ZSW5_9PLAN ;
ALN/Q_length_ratio=0.985 ; DESCRIPTION=DNA ligase
OS=Blastopirellula marina DSM 3645 GN=ligA PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|D5XD69|D5XD69_THEPJ ;
ALN/Q_length_ratio=0.971 ; DESCRIPTION=DNA ligase
OS=Thermincola potens (strain JR) GN=ligA PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.024"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|F7NF00|F7NF00_9FIRM ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=DNA ligase
OS=Acetonema longum DSM 6540 GN=ligA PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|L0DBZ5|L0DBZ5_SINAD ;
ALN/Q_length_ratio=0.971 ; DESCRIPTION=DNA ligase
OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=ligA PE=3 SV=1 ; EVALUE=0.0
; Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|G0VS68|G0VS68_MEGEL ;
ALN/Q_length_ratio=0.959 ; DESCRIPTION=DNA ligase
OS=Megasphaera elsdenii DSM 20460 GN=ligA PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.027"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A099DT98|A0A099DT98_MEGEL ;
ALN/Q_length_ratio=0.959 ; DESCRIPTION=DNA ligase
OS=Megasphaera elsdenii GN=ligA PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.027"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|K8EL45|K8EL45_9FIRM ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=DNA ligase
OS=Desulfotomaculum hydrothermale Lam5 = DSM 18033 GN=ligA
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.018"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F6B7U7|F6B7U7_DESCC ;
ALN/Q_length_ratio=0.959 ; DESCRIPTION=DNA ligase
OS=Desulfotomaculum carboxydivorans (strain DSM 14880 /
VKM B-2319 / CO-1-SRB) GN=ligA PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.018"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|C9RD93|C9RD93_AMMDK ;
ALN/Q_length_ratio=0.965 ; DESCRIPTION=DNA ligase
OS=Ammonifex degensii (strain DSM 10501 / KC4) GN=ligA
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|D9RYR7|D9RYR7_THEOJ ;
ALN/Q_length_ratio=0.968 ; DESCRIPTION=DNA ligase
OS=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM
16646 / JW/IW-1228P) GN=ligA PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A090KMY3|A0A090KMY3_9BACT ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=DNA ligase
OS=uncultured bacterium GN=ligA PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.016"
/note="Pfam_scan:hit_1 (10..325);
Pfam:PF01653.13:DNA_ligase_aden;
Pfam_type:Domain;HMM_aln_Length:310; HMM_Length:315;
EVALUE:9.4e-115; BITSCORE: 382.8"
/note="Pfam_scan:hit_2 (327..409);
Pfam:PF03120.11:DNA_ligase_OB;
Pfam_type:Domain;HMM_aln_Length:78; HMM_Length:82;
EVALUE:3.3e-25; BITSCORE: 87.5"
/note="Pfam_scan:hit_3 (520..583); Pfam:PF12826.2:HHH_2;
Pfam_type:Motif;HMM_aln_Length:63; HMM_Length:64;
EVALUE:2.3e-11; BITSCORE: 43.3"
/note="Pfam_scan:hit_4 (602..678); Pfam:PF00533.21:BRCT;
Pfam_type:Family;HMM_aln_Length:72; HMM_Length:78;
EVALUE:1.6e-11; BITSCORE: 44.1"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0006259"
/note="GO_domain:GO:0016874"
/note="GO_domain:GO:0006950"
/note="Enzyme_Code:EC:6.5.1.2"
/note="Enzyme_Code:EC:6.5.1"
BEGIN
1 MAKTTTASPA APADRAAELR KQLDHHNHLY YVEAAPVISD REFDKLLQEL ANIEKAHPEL
61 VTPDSPTQRV GGAPVPGFKQ VTHKVPMLSI ENSYDEGDLR KFDADVKKAL GASAVVEYVV
121 ELKIDGVSMS ITYENGKLAF AATRGSGSVG DDVTHNVKTI AAIPLKLNTN SPPAIFEARG
181 EVYMTRSELA RINAEQTKNK QEPYKNARNL SAGTLKLLDP RECAKRKLSM FAYGSGAIDG
241 LVIKKQSEML AKLKEFGFPV NPHERLCASI DEVIAYCKGW DTKRKELPYD TDGIVVKVND
301 WAQRERIGYT AKVPKWARAF KFEAEQGTTK LGAVVFHIGK FGELTPVATF DPPVQLAGTT
361 VTHASMHNAS WVAEMDVRIG DTVVVEKKGE IIPQIVDVIK ADRKGTETVI TWPENCPECG
421 GPVVKQESAS SYNFICSNPE SCSGGMWKRL EGYARKTRME IDGLGREVAI QLVESGLVKS
481 VADLYRLTKK QLLALEKFAD TKAQKLLDGI AASKDRGLAR LLPALAIYSV GEKMADDLVE
541 EFPDIDLIIA AKPEDLARVK GWGPERAKYL RAYFDGENGR KLIAELKELG IKMTHDKKAA
601 PVGGLPLAGK TIVVTGTLVN YDRVGIETAI KDAGGKASGS VSKKTDFLLL GENPGSKHAK
661 AKELGVKIIN EDEFRQIIGA G
//