LOCUS VTS03171.1 330 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana Xylose isomerase domain-containing
protein TIM barrel OS=Planctomyces brasiliensis (strain
ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM
1448) GN=Plabr_0323 PE=4 SV=1: AP_endonuc_2: AP_endonuc_2_N
protein.
ACCESSION LR593886-8320
PROTEIN_ID VTS03171.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_72720"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|F0SQH7|F0SQH7_PLABD ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=Xylose isomerase
domain-containing protein TIM barrel OS=Planctomyces
brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /
NBRC 103401 / IFAM 1448) GN=Plabr_0323 PE=4 SV=1 ;
EVALUE=1e-141 ; Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D5STP8|D5STP8_PLAL2 ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Planctomyces limnophilus
(strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
GN=Plim_3264 PE=4 SV=1 ; EVALUE=1e-133 ;
Q/S_length_ratio=0.997"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A6C140|A6C140_9PLAN ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_05660
PE=4 SV=1 ; EVALUE=1e-132 ; Q/S_length_ratio=0.997"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D2QXM5|D2QXM5_PIRSD ;
ALN/Q_length_ratio=0.964 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Pirellula staleyi (strain
ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_1535 PE=4 SV=1
; EVALUE=1e-131 ; Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|M5TUH5|M5TUH5_9PLAN ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=Sugar phosphate
isomerase/epimerase OS=Rhodopirellula sallentina SM41
GN=RSSM_05762 PE=4 SV=1 ; EVALUE=1e-129 ;
Q/S_length_ratio=0.991"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|L7CRI6|L7CRI6_RHOBT ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=Xylose isomerase
domain-containing protein OS=Rhodopirellula baltica SWK14
GN=RBSWK_00406 PE=4 SV=1 ; EVALUE=1e-128 ;
Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|Q7US81|Q7US81_RHOBA ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=Putative
uncharacterized protein OS=Rhodopirellula baltica (strain
SH1) GN=RB4654 PE=4 SV=1 ; EVALUE=1e-128 ;
Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|K5CAM7|K5CAM7_RHOBT ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=Xylose isomerase
domain-containing protein OS=Rhodopirellula baltica SH28
GN=RBSH_04336 PE=4 SV=1 ; EVALUE=1e-128 ;
Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A3ZNG4|A3ZNG4_9PLAN ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=Uncharacterized
protein OS=Blastopirellula marina DSM 3645
GN=DSM3645_16945 PE=4 SV=1 ; EVALUE=1e-128 ;
Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F2ATI6|F2ATI6_RHOBT ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=Xylose isomerase
domain-containing protein OS=Rhodopirellula baltica WH47
GN=RBWH47_05616 PE=4 SV=1 ; EVALUE=1e-127 ;
Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5S1N2|M5S1N2_9PLAN ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=Xylose isomerase
domain-containing protein OS=Rhodopirellula europaea SH398
GN=RESH_04061 PE=4 SV=1 ; EVALUE=1e-127 ;
Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M5TQM3|M5TQM3_9PLAN ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=Xylose isomerase
domain-containing protein OS=Rhodopirellula sp. SWK7
GN=RRSWK_01407 PE=4 SV=1 ; EVALUE=1e-127 ;
Q/S_length_ratio=0.935"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M2AQ11|M2AQ11_9PLAN ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=Xylose isomerase
domain-containing protein OS=Rhodopirellula europaea 6C
GN=RE6C_04435 PE=4 SV=1 ; EVALUE=1e-127 ;
Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|Q1AZ10|Q1AZ10_RUBXD ;
ALN/Q_length_ratio=0.964 ; DESCRIPTION=Xylose
isomerase-like TIM barrel OS=Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129) GN=Rxyl_0393 PE=4 SV=1 ;
EVALUE=1e-124 ; Q/S_length_ratio=0.991"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M5RBT6|M5RBT6_9PLAN ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=Sugar phosphate
isomerase/epimerase OS=Rhodopirellula maiorica SM1
GN=RMSM_06122 PE=4 SV=1 ; EVALUE=1e-123 ;
Q/S_length_ratio=0.997"
/note="Pfam_scan:hit_1 (21..273);
Pfam:PF01261.19:AP_endonuc_2;
Pfam_type:Domain;HMM_aln_Length:209; HMM_Length:213;
EVALUE:9.5e-35; BITSCORE: 119.8"
/note="Pfam_scan:hit_2 (274..328);
Pfam:PF07582.7:AP_endonuc_2_N;
Pfam_type:Family;HMM_aln_Length:49; HMM_Length:55;
EVALUE:3.9e-17; BITSCORE: 61.5"
BEGIN
1 MGRPIVLFSG PWADLPLDSL ATKTAGWGYA GFELCCWGDH LEVQRGLSDD GYPPARLDLL
61 ARHDLQVPVI ANHKVGQAVS DVIDKRHQSL VPDYVWGDGA PAGVQQRAAE EMKATFRLAE
121 RLGAGVVSGF TGSPIWGYVA GYPAPRQDVI ADALRQFARQ WHPILDAARE AGVRFACEVH
181 PGQLAFDLYS AELVLDALDG REDFGFTFDP SHMHWQGIDP VEFLRRFPDR IYHVHIKDAQ
241 LTLNGRAGVL AGYWPSGDPR AGWQFRSPGH GGIDWAAIIR GLNAIGYDGP LSVDWHDPGM
301 DREYGAADAL RFLKQLDFDP PAHGPKAFRG
//