LOCUS VTS03141.1 147 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana acetoacetate metabolism regulatory
protein : Sigma-54 interaction domain protein OS=Treponema
phagedenis F0421 GN=HMPREF9554_01420 PE=4 SV=1: Response_reg
protein.
ACCESSION LR593886-8310
PROTEIN_ID VTS03141.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_72820"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|E7NTM8|E7NTM8_TREPH ;
ALN/Q_length_ratio=0.816 ; DESCRIPTION=Sigma-54
interaction domain protein OS=Treponema phagedenis F0421
GN=HMPREF9554_01420 PE=4 SV=1 ; EVALUE=9e-26 ;
Q/S_length_ratio=0.322"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|X1DR73|X1DR73_9ZZZZ ;
ALN/Q_length_ratio=0.823 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S03H2_C00597 OS=marine sediment
metagenome GN=S03H2_01912 PE=4 SV=1 ; EVALUE=1e-25 ;
Q/S_length_ratio=0.875"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|X1H950|X1H950_9ZZZZ ;
ALN/Q_length_ratio=0.823 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S03H2_S16938 (Fragment) OS=marine
sediment metagenome GN=S03H2_52537 PE=4 SV=1 ;
EVALUE=2e-25 ; Q/S_length_ratio=0.758"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|X0UHG0|X0UHG0_9ZZZZ ;
ALN/Q_length_ratio=0.823 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_S05483 (Fragment) OS=marine
sediment metagenome GN=S01H1_32695 PE=4 SV=1 ;
EVALUE=8e-25 ; Q/S_length_ratio=0.551"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|S3JT09|S3JT09_TREMD ;
ALN/Q_length_ratio=0.823 ; DESCRIPTION=Uncharacterized
protein OS=Treponema medium ATCC 700293
GN=HMPREF9195_01957 PE=4 SV=1 ; EVALUE=1e-24 ;
Q/S_length_ratio=0.321"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|S3LDY0|S3LDY0_9SPIO ;
ALN/Q_length_ratio=0.823 ; DESCRIPTION=Uncharacterized
protein OS=Treponema vincentii F0403 GN=HMPREF1222_00261
PE=4 SV=1 ; EVALUE=2e-24 ; Q/S_length_ratio=0.322"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A0A0X2K1|A0A0A0X2K1_9SPIO ;
ALN/Q_length_ratio=0.823 ; DESCRIPTION=Acetoacetate
metabolism regulatory protein AtoC OS=Treponema sp. OMZ
838 GN=JO41_11960 PE=4 SV=1 ; EVALUE=2e-24 ;
Q/S_length_ratio=0.321"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|C8PS46|C8PS46_9SPIO ;
ALN/Q_length_ratio=0.823 ; DESCRIPTION=Sigma-54
interaction domain protein OS=Treponema vincentii ATCC
35580 GN=TREVI0001_1210 PE=4 SV=1 ; EVALUE=2e-24 ;
Q/S_length_ratio=0.322"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|S5ZWD4|S5ZWD4_9SPIO ;
ALN/Q_length_ratio=0.816 ; DESCRIPTION=Sigma-54 dependent
transcriptional regulator/response regulator OS=Treponema
pedis str. T A4 GN=TPE_2216 PE=4 SV=1 ; EVALUE=3e-24 ;
Q/S_length_ratio=0.322"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|E9S5I9|E9S5I9_TREDN ;
ALN/Q_length_ratio=0.816 ; DESCRIPTION=Sigma-54 dependent
transcriptional regulator/response regulator OS=Treponema
denticola F0402 GN=HMPREF9353_02022 PE=4 SV=1 ;
EVALUE=7e-24 ; Q/S_length_ratio=0.311"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|S3KPB4|S3KPB4_TREDN ;
ALN/Q_length_ratio=0.816 ; DESCRIPTION=Uncharacterized
protein OS=Treponema denticola SP23 GN=HMPREF9731_00792
PE=4 SV=1 ; EVALUE=7e-24 ; Q/S_length_ratio=0.311"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M2AQX0|M2AQX0_TREDN ;
ALN/Q_length_ratio=0.816 ; DESCRIPTION=Uncharacterized
protein OS=Treponema denticola SP37 GN=HMPREF9724_02544
PE=4 SV=1 ; EVALUE=7e-24 ; Q/S_length_ratio=0.311"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M2D9M0|M2D9M0_TREDN ;
ALN/Q_length_ratio=0.816 ; DESCRIPTION=Uncharacterized
protein OS=Treponema denticola AL-2 GN=HMPREF9730_02502
PE=4 SV=1 ; EVALUE=7e-24 ; Q/S_length_ratio=0.311"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|S3KM17|S3KM17_TREDN ;
ALN/Q_length_ratio=0.816 ; DESCRIPTION=Uncharacterized
protein OS=Treponema denticola SP44 GN=HMPREF9734_01864
PE=4 SV=1 ; EVALUE=7e-24 ; Q/S_length_ratio=0.311"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M2CL32|M2CL32_TREDN ;
ALN/Q_length_ratio=0.816 ; DESCRIPTION=Uncharacterized
protein OS=Treponema denticola H-22 GN=HMPREF9726_00690
PE=4 SV=1 ; EVALUE=7e-24 ; Q/S_length_ratio=0.311"
/note="Pfam_scan:hit_1 (16..127);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:108; HMM_Length:112;
EVALUE:3e-24; BITSCORE: 85.1"
/note="GO_domain:GO:0007165"
BEGIN
1 MITELSPPPA TVSRRVLIVE DLEDSRESLQ ELLQEALKIE VDTAADGVRG LELLAERPYA
61 LVVTDLRMPK ASGMRVLREV QDRALPCAVV VMTGHGSVRE AVEAMRLGAY DFLQKPLDPQ
121 KFVLLVDRVL RERELVAIGG RKEFGQD
//