LOCUS VTS03023.1 294 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana formamidopyrimidine-dna glycosylase
: Formamidopyrimidine-DNA glycosylase OS=Pseudogulbenkiania
ferrooxidans 2002 GN=mutM PE=3 SV=1: Fapy_DNA_glyco: H2TH:
zf-FPG_IleRS protein.
ACCESSION LR593886-8271
PROTEIN_ID VTS03023.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_73210"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|B9YZ64|B9YZ64_9NEIS ;
ALN/Q_length_ratio=0.918 ;
DESCRIPTION=Formamidopyrimidine-DNA glycosylase
OS=Pseudogulbenkiania ferrooxidans 2002 GN=mutM PE=3 SV=1
; EVALUE=1e-70 ; Q/S_length_ratio=1.081"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|G2J032|G2J032_PSEUL ;
ALN/Q_length_ratio=0.918 ;
DESCRIPTION=Formamidopyrimidine-DNA glycosylase
OS=Pseudogulbenkiania sp. (strain NH8B) GN=mutM PE=3 SV=1
; EVALUE=4e-70 ; Q/S_length_ratio=1.081"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L5NAZ5|L5NAZ5_9BACI ;
ALN/Q_length_ratio=0.929 ;
DESCRIPTION=Formamidopyrimidine-DNA glycosylase
OS=Halobacillus sp. BAB-2008 GN=mutM PE=3 SV=1 ;
EVALUE=2e-64 ; Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A0A068JUB5|A0A068JUB5_9DELT ;
ALN/Q_length_ratio=0.915 ;
DESCRIPTION=Formamidopyrimidine-DNA glycosylase
OS=Desulfonatronum thiodismutans GN=mutM PE=3 SV=1 ;
EVALUE=1e-63 ; Q/S_length_ratio=1.085"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D8JYD3|D8JYD3_HYPDA ;
ALN/Q_length_ratio=0.993 ;
DESCRIPTION=Formamidopyrimidine-DNA glycosylase
OS=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM
1869 / NCIB 11706 / TK 0415) GN=mutM PE=3 SV=1 ;
EVALUE=1e-63 ; Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A024P775|A0A024P775_9BACI ;
ALN/Q_length_ratio=0.929 ;
DESCRIPTION=Formamidopyrimidine-DNA glycosylase
OS=Halobacillus karajensis GN=mutM PE=3 SV=1 ;
EVALUE=1e-63 ; Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A024PIK1|A0A024PIK1_9BACI ;
ALN/Q_length_ratio=0.929 ;
DESCRIPTION=Formamidopyrimidine-DNA glycosylase
OS=Halobacillus trueperi GN=mutM PE=3 SV=1 ; EVALUE=1e-63
; Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A024NSK9|A0A024NSK9_HALDA ;
ALN/Q_length_ratio=0.929 ;
DESCRIPTION=Formamidopyrimidine-DNA glycosylase
OS=Halobacillus dabanensis GN=mutM PE=3 SV=1 ;
EVALUE=1e-63 ; Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|H8KCE6|H8KCE6_RICMS ;
ALN/Q_length_ratio=0.922 ;
DESCRIPTION=Formamidopyrimidine-DNA glycosylase
OS=Rickettsia montanensis (strain OSU 85-930) GN=mutM PE=3
SV=1 ; EVALUE=1e-62 ; Q/S_length_ratio=1.077"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A075MGX0|A0A075MGX0_9RICK ;
ALN/Q_length_ratio=0.918 ;
DESCRIPTION=Formamidopyrimidine-DNA glycosylase
OS=endosymbiont of Acanthamoeba sp. UWC8 GN=mutM PE=3 SV=1
; EVALUE=5e-62 ; Q/S_length_ratio=1.085"
/note="BLAST_uniprot:hit_11 ; ACCESSION=Q6APT2 ;
ALN/Q_length_ratio=0.935 ;
DESCRIPTION=Formamidopyrimidine-DNA glycosylase
OS=Desulfotalea psychrophila (strain LSv54 / DSM 12343)
GN=mutM PE=3 SV=3 ; EVALUE=7e-62 ; Q/S_length_ratio=1.061"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A0A0HSR7|A0A0A0HSR7_9RHOB ;
ALN/Q_length_ratio=0.959 ;
DESCRIPTION=Formamidopyrimidine-DNA glycosylase
OS=Roseovarius mucosus DSM 17069 GN=mutM PE=3 SV=1 ;
EVALUE=2e-61 ; Q/S_length_ratio=1.039"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|K9IEZ0|K9IEZ0_9LACO ;
ALN/Q_length_ratio=0.925 ;
DESCRIPTION=Formamidopyrimidine-DNA glycosylase
OS=Pediococcus lolii NGRI 0510Q GN=mutM PE=3 SV=1 ;
EVALUE=2e-61 ; Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_14 ; ACCESSION=A3PFL2 ;
ALN/Q_length_ratio=0.959 ;
DESCRIPTION=Formamidopyrimidine-DNA glycosylase
OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9)
GN=mutM PE=3 SV=1 ; EVALUE=2e-61 ; Q/S_length_ratio=1.039"
/note="BLAST_uniprot:hit_13 ; ACCESSION=Q3IY64 ;
ALN/Q_length_ratio=0.959 ;
DESCRIPTION=Formamidopyrimidine-DNA glycosylase
OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 /
NCIB 8253 / DSM 158) GN=mutM PE=3 SV=3 ; EVALUE=2e-61 ;
Q/S_length_ratio=1.039"
/note="Pfam_scan:hit_1 (2..120);
Pfam:PF01149.19:Fapy_DNA_glyco;
Pfam_type:Domain;HMM_aln_Length:113; HMM_Length:116;
EVALUE:4.9e-28; BITSCORE: 97.8"
/note="Pfam_scan:hit_2 (136..226); Pfam:PF06831.9:H2TH;
Pfam_type:Domain;HMM_aln_Length:90; HMM_Length:93;
EVALUE:1.3e-24; BITSCORE: 85.7"
/note="Pfam_scan:hit_3 (246..275);
Pfam:PF06827.9:zf-FPG_IleRS;
Pfam_type:Domain;HMM_aln_Length:27; HMM_Length:30;
EVALUE:6.5e-05; BITSCORE: 22.4"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0004518"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0016829"
/note="GO_domain:GO:0034655"
/note="GO_domain:GO:0006259"
/note="GO_domain:GO:0006950"
/note="GO_domain:GO:0016798"
/note="Enzyme_Code:EC:3.1"
/note="Enzyme_Code:EC:4.2.99.18"
/note="Enzyme_Code:EC:3.2.2.23"
/note="Enzyme_Code:EC:3.2.2"
BEGIN
1 MPELPEVETV VRDLRPLLVG RTITSVRQSR HKLRRPWKPA WNANAIDSRV ESVRRRGKWI
61 LIDLASQSSS PLLRVHLGMS GQFTIVPATL AEPDHVHVVF ALDGGNELRL RDPRRFGAAE
121 YFPDRAALET EMNADLGPEP FGLNADYFRS VVRGTARNLK AVLLDQKIVA GVGNIYADEA
181 LFRAKLHPGR AGKSVTNAEC DHLREAIEAV LLRAIESRGS TIRDYVGGSG LRGGFQNEFA
241 VYGRTDERCS VCEGTIACAR FAGRTSHYCP QCQSQGIGKK VKSTKTPRAP TSRS
//