LOCUS VTS02951.1 482 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dna ligase : DNA ligase OS=Blastopirellula
marina DSM 3645 GN=DSM3645_13253 PE=4 SV=1: DNA_ligase_A_M:
DNA_ligase_OB_2: WGR protein.
ACCESSION LR593886-8247
PROTEIN_ID VTS02951.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_73450"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A4A2I8|A4A2I8_9PLAN ;
ALN/Q_length_ratio=0.882 ; DESCRIPTION=DNA ligase
OS=Blastopirellula marina DSM 3645 GN=DSM3645_13253 PE=4
SV=1 ; EVALUE=1e-148 ; Q/S_length_ratio=1.129"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A017TBB9|A0A017TBB9_9DELT ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=DNA ligase (ATP)
OS=Chondromyces apiculatus DSM 436 GN=CAP_2300 PE=4 SV=1 ;
EVALUE=1e-128 ; Q/S_length_ratio=0.951"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|F8CR28|F8CR28_MYXFH ;
ALN/Q_length_ratio=0.714 ; DESCRIPTION=DNA ligase
OS=Myxococcus fulvus (strain ATCC BAA-855 / HW-1)
GN=LILAB_05755 PE=4 SV=1 ; EVALUE=1e-119 ;
Q/S_length_ratio=1.389"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A0A084T0Q8|A0A084T0Q8_9DELT ;
ALN/Q_length_ratio=0.751 ; DESCRIPTION=DNA ligase
OS=Cystobacter violaceus Cb vi76 GN=Q664_03840 PE=4 SV=1 ;
EVALUE=1e-119 ; Q/S_length_ratio=1.321"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|L0DG54|L0DG54_SINAD ;
ALN/Q_length_ratio=0.703 ; DESCRIPTION=ATP dependent DNA
ligase-like protein OS=Singulisphaera acidiphila (strain
ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_3390 PE=4 SV=1 ; EVALUE=1e-117 ;
Q/S_length_ratio=1.389"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|Q1DEP0|Q1DEP0_MYXXD ;
ALN/Q_length_ratio=0.720 ; DESCRIPTION=DNA ligase,
ATP-dependent OS=Myxococcus xanthus (strain DK 1622)
GN=MXAN_0615 PE=4 SV=1 ; EVALUE=1e-117 ;
Q/S_length_ratio=1.350"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|L7U332|L7U332_MYXSD ;
ALN/Q_length_ratio=0.714 ; DESCRIPTION=DNA ligase
OS=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 /
Mx s8) GN=MYSTI_00617 PE=4 SV=1 ; EVALUE=1e-114 ;
Q/S_length_ratio=1.350"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|U2SI38|U2SI38_9DELT ;
ALN/Q_length_ratio=0.714 ; DESCRIPTION=DNA ligase (ATP)
protein OS=Myxococcus sp. (contaminant ex DSM 436)
GN=A176_01060 PE=4 SV=1 ; EVALUE=1e-114 ;
Q/S_length_ratio=1.377"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A085XAI5|A0A085XAI5_9DELT ;
ALN/Q_length_ratio=0.720 ; DESCRIPTION=DNA ligase (ATP)
OS=Enhygromyxa salina GN=DB30_4611 PE=4 SV=1 ;
EVALUE=1e-114 ; Q/S_length_ratio=1.335"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A085WJQ3|A0A085WJQ3_9DELT ;
ALN/Q_length_ratio=0.720 ; DESCRIPTION=DNA ligase (ATP)
OS=Hyalangium minutum GN=DB31_7153 PE=4 SV=1 ;
EVALUE=1e-114 ; Q/S_length_ratio=1.335"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|S9Q5A8|S9Q5A8_9DELT ;
ALN/Q_length_ratio=0.722 ; DESCRIPTION=DNA ligase (ATP)
OS=Cystobacter fuscus DSM 2262 GN=D187_007856 PE=4 SV=1 ;
EVALUE=1e-112 ; Q/S_length_ratio=1.377"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A085Y6B7|A0A085Y6B7_9DELT ;
ALN/Q_length_ratio=0.635 ; DESCRIPTION=DNA ligase (ATP)
OS=Sandaracinus amylolyticus GN=DB32_6518 PE=4 SV=1 ;
EVALUE=1e-102 ; Q/S_length_ratio=1.497"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|L8H8E1|L8H8E1_ACACA ;
ALN/Q_length_ratio=0.693 ; DESCRIPTION=ATPdependent DNA
ligase domain containing protein OS=Acanthamoeba
castellanii str. Neff GN=ACA1_183710 PE=4 SV=1 ;
EVALUE=4e-98 ; Q/S_length_ratio=0.551"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|E9C5K3|E9C5K3_CAPO3 ;
ALN/Q_length_ratio=0.749 ; DESCRIPTION=DNA ligase
OS=Capsaspora owczarzaki (strain ATCC 30864) GN=CAOG_03271
PE=4 SV=1 ; EVALUE=3e-94 ; Q/S_length_ratio=0.547"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|F2UAM4|F2UAM4_SALR5 ;
ALN/Q_length_ratio=0.693 ; DESCRIPTION=DNA ligase
OS=Salpingoeca rosetta (strain ATCC 50818 / BSB-021)
GN=PTSG_05144 PE=4 SV=1 ; EVALUE=5e-86 ;
Q/S_length_ratio=0.726"
/note="Pfam_scan:hit_1 (93..254);
Pfam:PF01068.16:DNA_ligase_A_M;
Pfam_type:Domain;HMM_aln_Length:181; HMM_Length:202;
EVALUE:3e-13; BITSCORE: 49.5"
/note="Pfam_scan:hit_2 (268..333);
Pfam:PF14743.1:DNA_ligase_OB_2;
Pfam_type:Domain;HMM_aln_Length:65; HMM_Length:66;
EVALUE:5.9e-25; BITSCORE: 86.7"
/note="Pfam_scan:hit_3 (410..481); Pfam:PF05406.10:WGR;
Pfam_type:Domain;HMM_aln_Length:66; HMM_Length:81;
EVALUE:5.8e-16; BITSCORE: 58.2"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0006259"
/note="GO_domain:GO:0016874"
/note="GO_domain:GO:0006950"
/note="Enzyme_Code:EC:6.5.1"
/note="Enzyme_Code:EC:6.5.1.1"
BEGIN
1 MDLNDGQIYE MQGSGKNPYK IKNVGGVYSC SCPAWLNQNA PSNARTCKHI RKLRGDAVEE
61 LRLASAGELL PPKPKGAEDK KELPLLQGEP WDEKQDLTGW WMSEKLDGVR AYWDGKQFLS
121 RGYNIYYAPD WFTAGLPNHP LDGELWIARK KFQPATDIAK SQGTPDRWKD LRYLVFDAPD
181 ASGPFEDRVK FLSTAAPTWK NQFTSLVEHI ACTGNDHVRA ELERVTGLGG EGLMLRKPGS
241 LYERVRSSTI LKVKKFLDME VVVTDYEPGE GRHAGRVGAL WVRLSTGVTC KVGTGLKDKD
301 RDNPPAKGSI ITVKYQELTD DGALRFPVYV GPRPDGYPNA VPPTRKKETF APVPEPVKIG
361 KATVAVVPPA PVVAAVTPPK PTEAPKPKSE PKPVPASPPT PTGGSTMDTT TKRYFEFVDG
421 SSNKFWEVWT EGTDVVTQWG KIGTPGRETR KEFSDAAKTQ KEYDKLVAEK TGKGYSEKPR
481 PA
//