LOCUS       VTS02858.1               142 aa    PRT              BCT 03-FEB-2020
DEFINITION  Gemmata massiliana rna polymerase sigma-70 ecf-like protein
            : DNA-directed RNA polymerase specialized sigma subunit,
            sigma24 OS=Singulisphaera acidiphila (strain ATCC BAA-
            1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_3738 PE=
            4 SV=1: Sigma70_ECF protein.
ACCESSION   LR593886-8216
PROTEIN_ID  VTS02858.1
SOURCE      Gemmata massiliana
  ORGANISM  Gemmata massiliana
            Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
            Gemmata.
REFERENCE   1
  AUTHORS   
  CONSRTM   Science for Life Laboratories
  JOURNAL   Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
            MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
            Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES             Qualifiers
     source          /organism="Gemmata massiliana"
                     /chromosome="1"
                     /isolate="Soil9"
                     /mol_type="genomic DNA"
                     /isolation_source="soil"
                     /db_xref="taxon:1210884"
     protein         /locus_tag="SOIL9_73760"
                     /note="BLAST_uniprot:hit_1 ;
                     ACCESSION=tr|L0DH37|L0DH37_SINAD ;
                     ALN/Q_length_ratio=0.908 ; DESCRIPTION=DNA-directed RNA
                     polymerase specialized sigma subunit, sigma24
                     OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
                     18658 / VKM B-2454 / MOB10) GN=Sinac_3738 PE=4 SV=1 ;
                     EVALUE=6e-22 ; Q/S_length_ratio=0.706"
                     /note="BLAST_uniprot:hit_2 ;
                     ACCESSION=tr|M5UAE9|M5UAE9_9PLAN ;
                     ALN/Q_length_ratio=0.965 ; DESCRIPTION=Transcription
                     regulator LuxR OS=Rhodopirellula sallentina SM41
                     GN=RSSM_00164 PE=4 SV=1 ; EVALUE=8e-14 ;
                     Q/S_length_ratio=0.693"
                     /note="BLAST_uniprot:hit_3 ;
                     ACCESSION=tr|M5T710|M5T710_9PLAN ;
                     ALN/Q_length_ratio=0.965 ; DESCRIPTION=RNA polymerase
                     sigma-70 OS=Rhodopirellula sp. SWK7 GN=RRSWK_02458 PE=4
                     SV=1 ; EVALUE=9e-13 ; Q/S_length_ratio=0.686"
                     /note="BLAST_uniprot:hit_4 ;
                     ACCESSION=tr|A6C775|A6C775_9PLAN ;
                     ALN/Q_length_ratio=0.958 ; DESCRIPTION=Serine/threonine
                     protein kinase OS=Planctomyces maris DSM 8797
                     GN=PM8797T_04305 PE=4 SV=1 ; EVALUE=3e-09 ;
                     Q/S_length_ratio=0.303"
                     /note="BLAST_uniprot:hit_5 ;
                     ACCESSION=tr|M5SVC9|M5SVC9_9PLAN ;
                     ALN/Q_length_ratio=1.014 ; DESCRIPTION=RNA polymerase
                     sigma-70 ECF-like protein OS=Rhodopirellula sp. SWK7
                     GN=RRSWK_06786 PE=4 SV=1 ; EVALUE=5e-07 ;
                     Q/S_length_ratio=0.566"
                     /note="BLAST_uniprot:hit_6 ;
                     ACCESSION=tr|A0A090KMS8|A0A090KMS8_9BACT ;
                     ALN/Q_length_ratio=0.937 ; DESCRIPTION=Uncultured
                     bacterium genome assembly Metasoil_fosmids_resub
                     OS=uncultured bacterium PE=4 SV=1 ; EVALUE=6e-06 ;
                     Q/S_length_ratio=0.703"
                     /note="Pfam_scan:hit_1 (2..137);
                     Pfam:PF07638.6:Sigma70_ECF;
                     Pfam_type:Family;HMM_aln_Length:103; HMM_Length:185;
                     EVALUE:2.5e-08; BITSCORE: 33.8"
                     /note="GO_domain:GO:0003677"
                     /note="GO_domain:GO:0034641"
                     /note="GO_domain:GO:0009058"
BEGIN
        1 MVQSAFKSFF FRYRDGKLRV GDWDHTWALL ALITRRKCAD RVEHLRAMRR AVDREASVPN
       61 GADQPWQLIA DHEPLPEEVA SLTETVELLF RSSEADERPI LELSLQGYTA AKIAAQLGKA
      121 LRTVHRLRER IHKRLLRLRG EN
//