LOCUS VTS02772.1 776 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana ribonuclease r : Ribonuclease R OS=
Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=rnr PE=3 SV=1: OB_RNB:
RNB: S1 protein.
ACCESSION LR593886-8187
PROTEIN_ID VTS02772.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_74050"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DA55|L0DA55_SINAD ;
ALN/Q_length_ratio=0.927 ; DESCRIPTION=Ribonuclease R
OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=rnr PE=3 SV=1 ; EVALUE=0.0
; Q/S_length_ratio=1.014"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|R6EKB4|R6EKB4_9FIRM ;
ALN/Q_length_ratio=0.932 ; DESCRIPTION=Ribonuclease R
OS=Firmicutes bacterium CAG:65 GN=rnr PE=3 SV=1 ;
EVALUE=1e-129 ; Q/S_length_ratio=1.053"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|R5XUN0|R5XUN0_9CLOT ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=Ribonuclease R
OS=Clostridium sp. CAG:571 GN=rnr PE=3 SV=1 ;
EVALUE=1e-124 ; Q/S_length_ratio=0.929"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|R5E4A5|R5E4A5_9CLOT ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=Ribonuclease R
OS=Clostridium sp. CAG:590 GN=rnr PE=3 SV=1 ;
EVALUE=1e-123 ; Q/S_length_ratio=1.040"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|R6BB76|R6BB76_9BACT ;
ALN/Q_length_ratio=0.942 ; DESCRIPTION=Ribonuclease R
OS=Prevotella sp. CAG:604 GN=rnr PE=3 SV=1 ; EVALUE=1e-116
; Q/S_length_ratio=1.009"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F5T688|F5T688_9FIRM ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=Ribonuclease R
OS=Oribacterium sp. oral taxon 108 str. F0425 GN=rnr PE=3
SV=1 ; EVALUE=1e-115 ; Q/S_length_ratio=0.984"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|R6QRI2|R6QRI2_9BACT ;
ALN/Q_length_ratio=0.911 ; DESCRIPTION=Ribonuclease R
OS=Prevotella sp. CAG:386 GN=rnr PE=3 SV=1 ; EVALUE=1e-115
; Q/S_length_ratio=1.014"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|E4LK85|E4LK85_9FIRM ;
ALN/Q_length_ratio=0.896 ; DESCRIPTION=Ribonuclease R
OS=Selenomonas sp. oral taxon 137 str. F0430 GN=rnr PE=3
SV=1 ; EVALUE=1e-114 ; Q/S_length_ratio=0.856"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|D4S739|D4S739_9FIRM ;
ALN/Q_length_ratio=0.914 ; DESCRIPTION=Ribonuclease R
OS=Selenomonas noxia ATCC 43541 GN=rnr PE=3 SV=1 ;
EVALUE=1e-114 ; Q/S_length_ratio=0.862"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|E7N4X5|E7N4X5_9FIRM ;
ALN/Q_length_ratio=0.896 ; DESCRIPTION=Ribonuclease R
OS=Selenomonas artemidis F0399 GN=rnr PE=3 SV=1 ;
EVALUE=1e-114 ; Q/S_length_ratio=0.856"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D1PE18|D1PE18_9BACT ;
ALN/Q_length_ratio=0.878 ; DESCRIPTION=Ribonuclease R
OS=Prevotella copri DSM 18205 GN=rnr PE=3 SV=1 ;
EVALUE=1e-114 ; Q/S_length_ratio=1.014"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|W7D9K6|W7D9K6_9LIST ;
ALN/Q_length_ratio=0.884 ; DESCRIPTION=Ribonuclease R
OS=Brochothrix campestris FSL F6-1037 GN=rnr PE=3 SV=1 ;
EVALUE=1e-114 ; Q/S_length_ratio=0.985"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|J5I724|J5I724_9FIRM ;
ALN/Q_length_ratio=0.896 ; DESCRIPTION=Ribonuclease R
OS=Selenomonas sp. FOBRC9 GN=rnr PE=3 SV=1 ; EVALUE=1e-114
; Q/S_length_ratio=0.856"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|R6C1H7|R6C1H7_9BACT ;
ALN/Q_length_ratio=0.878 ; DESCRIPTION=Ribonuclease R
OS=Prevotella copri CAG:164 GN=rnr PE=3 SV=1 ;
EVALUE=1e-114 ; Q/S_length_ratio=1.014"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|E1KUM6|E1KUM6_9BACT ;
ALN/Q_length_ratio=0.860 ; DESCRIPTION=Ribonuclease R
OS=Prevotella disiens FB035-09AN GN=rnr PE=3 SV=1 ;
EVALUE=1e-114 ; Q/S_length_ratio=1.037"
/note="Pfam_scan:hit_1 (71..133); Pfam:PF08206.6:OB_RNB;
Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:58;
EVALUE:3.9e-06; BITSCORE: 26.2"
/note="Pfam_scan:hit_2 (249..622); Pfam:PF00773.14:RNB;
Pfam_type:Domain;HMM_aln_Length:322; HMM_Length:325;
EVALUE:1.2e-90; BITSCORE: 304.0"
/note="Pfam_scan:hit_3 (663..747); Pfam:PF00575.18:S1;
Pfam_type:Domain;HMM_aln_Length:68; HMM_Length:74;
EVALUE:2e-09; BITSCORE: 37.3"
/note="GO_domain:GO:0003723"
/note="GO_domain:GO:0004518"
/note="Enzyme_Code:EC:3.1"
BEGIN
1 MSDLLSKILH AVTAKSYVPL KAKPLFKRLN LPEDEYPAFR KTVRELVRTG RLALARNNTL
61 RAADIHGTVT GVYRRVTSGH GFVRPHTVDG TFKPEIFIRE DKGLDAATGD EVMVRVTREA
121 TRLKDAAGEI VRVLERATRT FVGTYFERDR QALVRVDGNA FTHSIAVGDA GAKGAKPQDK
181 VVIEMLRFPT QDSRGEGVVT EVLGAHGQPG VDTLSVIRAF GLPEVFPESA LNEARQVASQ
241 FSETDLHGRD DFTSELVITI DPPDAKDYDD AVSVTIDPKT KHWVLTVHIA DVAAFVKPGG
301 ALDTEARKRA TSVYLPQKVI PMFPEVISNG LASLQEGKVR YVKTVRMEFT PNLQKGHVTF
361 ANGAIRNRKR FTYDEVQEQL DVMEGKKQKQ PNPLTPFPKK EGGTEPNAAD TKRSAPVLSP
421 SPLRGGVGEG LQTEFPPDLP AMLRRMRDLA LLLRKKRFRR GALELTMPEA VLEYDADGRV
481 SGAHFAEHNL SHQIVEEFML AANEAVAEHF TRYEVPFLRR VHPAPNEEKL EAFGQFADLL
541 GYPIKRVQDR FELQRVLTET ADKPERAAVH FALLRSLKQA TYSPIQDEHY ALASQHYCHF
601 TSPIRRYPDL QVHRLLDKWI KTGSASANTE ELVALGDHCS KLERRAETAE RELVKLRLLT
661 YLSSRIGEAL DAVITGVADY GFFAQAERFP AEGLVHISSL VDDYYWFDES SHTLEGRRTK
721 RRFRLGDRVR LVVARVDLQR RMLDLRLADT HPKAEDDRGD ALPSYGRVPK SGRRRK
//