LOCUS VTS02535.1 904 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dna gyrase subunit a : DNA gyrase subunit
A OS=Rhodopirellula europaea 6C GN=gyrA PE=3 SV=1: DNA_topoisoIV:
DNA_gyraseA_C: DNA_gyraseA_C: DNA_gyraseA_C: DNA_gyraseA_C:
DNA_gyraseA_C: DNA_gyraseA_C protein.
ACCESSION LR593886-8108
PROTEIN_ID VTS02535.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_74840"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5U466|M5U466_9PLAN ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=DNA gyrase subunit
A OS=Rhodopirellula sallentina SM41 GN=gyrA PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.930"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|K5DPW4|K5DPW4_RHOBT ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=DNA gyrase subunit
A OS=Rhodopirellula baltica SH28 GN=gyrA PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.923"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F0SPZ1|F0SPZ1_PLABD ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=DNA gyrase subunit
A OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM
5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=gyrA PE=3
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.950"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|Q7UMG7|Q7UMG7_RHOBA ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=DNA gyrase subunit
A OS=Rhodopirellula baltica (strain SH1) GN=gyrA PE=3 SV=1
; EVALUE=0.0 ; Q/S_length_ratio=0.901"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|M5T9Q8|M5T9Q8_9PLAN ;
ALN/Q_length_ratio=0.981 ; DESCRIPTION=DNA gyrase subunit
A OS=Rhodopirellula sp. SWK7 GN=gyrA PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.925"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|D5SNH9|D5SNH9_PLAL2 ;
ALN/Q_length_ratio=0.988 ; DESCRIPTION=DNA gyrase subunit
A OS=Planctomyces limnophilus (strain ATCC 43296 / DSM
3776 / IFAM 1008 / 290) GN=gyrA PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.964"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5SBT1|M5SBT1_9PLAN ;
ALN/Q_length_ratio=0.960 ; DESCRIPTION=DNA gyrase subunit
A OS=Rhodopirellula europaea SH398 GN=gyrA PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.929"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|L0D7I2|L0D7I2_SINAD ;
ALN/Q_length_ratio=0.924 ; DESCRIPTION=DNA gyrase subunit
A OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=gyrA PE=3 SV=1 ; EVALUE=0.0
; Q/S_length_ratio=1.016"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A6CCA0|A6CCA0_9PLAN ;
ALN/Q_length_ratio=0.971 ; DESCRIPTION=DNA gyrase subunit
A OS=Planctomyces maris DSM 8797 GN=gyrA PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.984"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|D2QWS9|D2QWS9_PIRSD ;
ALN/Q_length_ratio=1.001 ; DESCRIPTION=DNA gyrase subunit
A OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 /
ICPB 4128) GN=gyrA PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.964"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|F2ALX4|F2ALX4_RHOBT ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=DNA gyrase subunit
A OS=Rhodopirellula baltica WH47 GN=gyrA PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.923"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|E8R6D3|E8R6D3_ISOPI ;
ALN/Q_length_ratio=0.928 ; DESCRIPTION=DNA gyrase subunit
A OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 /
IS1B) GN=gyrA PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.989"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A3ZRK0|A3ZRK0_9PLAN ;
ALN/Q_length_ratio=0.968 ; DESCRIPTION=DNA gyrase subunit
A OS=Blastopirellula marina DSM 3645 GN=gyrA PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.980"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L7CAK2|L7CAK2_RHOBT ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=DNA gyrase subunit
A OS=Rhodopirellula baltica SWK14 GN=gyrA PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.923"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|M2A5X6|M2A5X6_9PLAN ;
ALN/Q_length_ratio=0.960 ; DESCRIPTION=DNA gyrase subunit
A OS=Rhodopirellula europaea 6C GN=gyrA PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.924"
/note="Pfam_scan:hit_1 (47..519);
Pfam:PF00521.15:DNA_topoisoIV;
Pfam_type:Family;HMM_aln_Length:424; HMM_Length:426;
EVALUE:1.5e-131; BITSCORE: 439.1"
/note="Pfam_scan:hit_2 (550..596);
Pfam:PF03989.8:DNA_gyraseA_C;
Pfam_type:Repeat;HMM_aln_Length:43; HMM_Length:48;
EVALUE:3.9e-09; BITSCORE: 35.6"
/note="Pfam_scan:hit_3 (599..649);
Pfam:PF03989.8:DNA_gyraseA_C;
Pfam_type:Repeat;HMM_aln_Length:46; HMM_Length:48;
EVALUE:0.0051; BITSCORE: 16.0"
/note="Pfam_scan:hit_4 (655..700);
Pfam:PF03989.8:DNA_gyraseA_C;
Pfam_type:Repeat;HMM_aln_Length:43; HMM_Length:48;
EVALUE:0.00052; BITSCORE: 19.2"
/note="Pfam_scan:hit_5 (703..750);
Pfam:PF03989.8:DNA_gyraseA_C;
Pfam_type:Repeat;HMM_aln_Length:47; HMM_Length:48;
EVALUE:2e-14; BITSCORE: 52.6"
/note="Pfam_scan:hit_6 (754..842);
Pfam:PF03989.8:DNA_gyraseA_C;
Pfam_type:Repeat;HMM_aln_Length:44; HMM_Length:48;
EVALUE:0.00098; BITSCORE: 18.3"
/note="Pfam_scan:hit_7 (845..892);
Pfam:PF03989.8:DNA_gyraseA_C;
Pfam_type:Repeat;HMM_aln_Length:46; HMM_Length:48;
EVALUE:8.8e-13; BITSCORE: 47.3"
/note="GO_domain:GO:0016887"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0051276"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0005694"
/note="GO_domain:GO:0006259"
/note="GO_domain:GO:0016853"
/note="Enzyme_Code:EC:3.6.1"
/note="Enzyme_Code:EC:3.6.1.3"
/note="Enzyme_Code:EC:5.99.1"
/note="Enzyme_Code:EC:5.99.1.3"
/note="Enzyme_Code:EC:3.6.1.15"
BEGIN
1 MADATTPPNG PDAPPPAGAL AVIDPLDIVD ELRDSYLTYA QSVIISRALP DVRDGLKPSQ
61 RRILVAMNDL GLGPSTSTSK CAGIIGETMK RYHPHGDASI YDSLVRMAQD WNLRYRLVHG
121 QGNFGSIAGL PPAAHRYTEA RLTTAASELL EDLERDTVDF IDNYDGKYRE PLVLPGKFPN
181 LLVNGSDGIA VGMATHIPPH NLREVCTALT KLIDEPDATL ADLFQIIPGP DFPTGGQIMG
241 RQGIVDAYSR GAGKITLRAR ADIVEEGRGK TPVIVIREVP FQVTRNALTE EINQLVKDER
301 IANVRGIRDE SSARNGEPVR LVIELTNKGD PHLILNQLYQ YSKLQKTVSI IMLALVDGRP
361 RELTLKEMLQ KFLEHRVHVI RRRTEFLLRE AKRRGHILEG QLIAIADIEN VIKICRTSPN
421 RTEAKTRLQG LAVPSSLMQR AIGEAAFDAL QRELGTVSEY RMTEAQAEAV VRLQLGQLAA
481 LESDEILKEY LQLRDLIRGY ETLLSDDANV RAVIRDDLEK MAAKYGDARR TEITDGDGDV
541 DMEDLIVDEP NVVTITHEGF VKRMPLTEYR VQGRGGKGVQ GGLRDNDFVE HFFVASTKAY
601 LLCFANTGQM YWLKVYRIPQ AARTNAGRSI ANVLSLKPEE KITSIVPVRE FSEGYQLLMT
661 TRQGTVKKTD LMAYSNVRNG GIIGITLDEG DELINVALTK PGDEIILSTQ KGMAIRFRES
721 NARPMGRTAR GVKGIKLGKD DALVGMVVAD PDGVLLTVCE NGYGKRTPFG ANTPMPEGAT
781 DSDDDNATEP EVVEPETEST DSENENDPSN MRYRLQRRGG KGVKDVKVTA KNGKVIGITS
841 VRDGDEIMLI TKDGMVTRSR VDAIRIVGRN TQGVKVMNLS DGDRIVSVAK VAQDNVGDAG
901 EVKE
//