LOCUS VTS02505.1 388 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana Transcriptional repressor of the xylose
operon OS=Planctomyces maris DSM 8797 GN=PM8797T_07297
PE=4 SV=1: MarR_2: ROK protein.
ACCESSION LR593886-8098
PROTEIN_ID VTS02505.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_74940"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A6CEE9|A6CEE9_9PLAN ;
ALN/Q_length_ratio=0.964 ; DESCRIPTION=Transcriptional
repressor of the xylose operon OS=Planctomyces maris DSM
8797 GN=PM8797T_07297 PE=4 SV=1 ; EVALUE=1e-119 ;
Q/S_length_ratio=1.035"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DPP4|L0DPP4_SINAD ;
ALN/Q_length_ratio=0.987 ; DESCRIPTION=Transcriptional
regulator/sugar kinase OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_6743 PE=4 SV=1 ; EVALUE=1e-118 ;
Q/S_length_ratio=0.968"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D2R4U5|D2R4U5_PIRSD ;
ALN/Q_length_ratio=0.954 ; DESCRIPTION=ROK family protein
OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB
4128) GN=Psta_2492 PE=4 SV=1 ; EVALUE=1e-106 ;
Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A0A068NM65|A0A068NM65_9BACT ;
ALN/Q_length_ratio=0.987 ; DESCRIPTION=Transcriptional
repressor of the xylose operon OS=Fimbriimonas
ginsengisoli Gsoil 348 GN=OP10G_1285 PE=4 SV=1 ;
EVALUE=2e-83 ; Q/S_length_ratio=0.968"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|Q67NW4|Q67NW4_SYMTH ;
ALN/Q_length_ratio=0.990 ; DESCRIPTION=Transcriptional
repressor OS=Symbiobacterium thermophilum (strain T / IAM
14863) GN=STH1644 PE=4 SV=1 ; EVALUE=9e-45 ;
Q/S_length_ratio=0.963"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|E6TQC7|E6TQC7_BACCJ ;
ALN/Q_length_ratio=0.869 ; DESCRIPTION=ROK family protein
OS=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522
/ FERM P-1141 / JCM 9156 / N-4) GN=Bcell_1032 PE=4 SV=1 ;
EVALUE=5e-40 ; Q/S_length_ratio=0.926"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|U5CXB1|U5CXB1_THEYO ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=Xylose repressor
OS=Caldanaerobacter subterraneus subsp. yonseiensis KB-1
GN=O163_04365 PE=4 SV=1 ; EVALUE=1e-38 ;
Q/S_length_ratio=0.970"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|F5SCX5|F5SCX5_9BACL ;
ALN/Q_length_ratio=1.003 ; DESCRIPTION=Transcriptional
regulator OS=Desmospora sp. 8437 GN=xylR PE=4 SV=1 ;
EVALUE=3e-38 ; Q/S_length_ratio=0.956"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|I2N8F2|I2N8F2_9ACTO ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=ROK family protein
OS=Streptomyces tsukubaensis NRRL18488 GN=STSU_06313 PE=4
SV=1 ; EVALUE=8e-38 ; Q/S_length_ratio=0.975"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|D6BC64|D6BC64_9ACTO ;
ALN/Q_length_ratio=0.907 ; DESCRIPTION=ROK
domain-containing protein OS=Streptomyces albus J1074
GN=SSHG_05027 PE=4 SV=1 ; EVALUE=4e-37 ;
Q/S_length_ratio=0.968"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M9SPJ2|M9SPJ2_9ACTO ;
ALN/Q_length_ratio=0.907 ; DESCRIPTION=ROK
domain-containing protein OS=Streptomyces albus J1074
GN=XNR_0903 PE=4 SV=1 ; EVALUE=4e-37 ;
Q/S_length_ratio=0.975"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A069R252|A0A069R252_9ACTO ;
ALN/Q_length_ratio=0.907 ; DESCRIPTION=ROK family
transcriptional regulator OS=Streptomyces wadayamensis
GN=DC60_25605 PE=4 SV=1 ; EVALUE=4e-37 ;
Q/S_length_ratio=0.975"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|B4VD51|B4VD51_9ACTO ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=Cytoplasmic protein
OS=Streptomyces sp. Mg1 GN=SSAG_05679 PE=4 SV=1 ;
EVALUE=8e-37 ; Q/S_length_ratio=0.960"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A069K247|A0A069K247_9ACTO ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=Transcriptional
regulator OS=Streptomyces sp. NTK 937 GN=DT87_24765 PE=4
SV=1 ; EVALUE=5e-36 ; Q/S_length_ratio=0.972"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A024Z0M7|A0A024Z0M7_9ACTO ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=Transcriptional
regulator OS=Streptomyces sp. PCS3-D2 GN=AW27_00470 PE=4
SV=1 ; EVALUE=6e-36 ; Q/S_length_ratio=0.960"
/note="Pfam_scan:hit_1 (13..71); Pfam:PF12802.2:MarR_2;
Pfam_type:Family;HMM_aln_Length:52; HMM_Length:62;
EVALUE:1.3e-08; BITSCORE: 34.3"
/note="Pfam_scan:hit_2 (88..270); Pfam:PF00480.15:ROK;
Pfam_type:Family;HMM_aln_Length:155; HMM_Length:179;
EVALUE:4.3e-30; BITSCORE: 104.8"
BEGIN
1 MSAITTIRPA LVGKLNERQV LRVIQSRGAL SRAEVARESG LSAPTVSKAV ASLIKAGLLE
61 EADATELARG RPAPKLRLAT TSAQVLGVTI DVGHCEVVSA GLDGSLHDDA LTVPTPATYP
121 ELLRALEDAA KKLIARPGIT TLGLGMSLPG LVDYRKGCGV LSPNVPITNG HCPTTDLAKR
181 LGVECTLLQE SHALCLAERH YGLAKGMDDF ALLDVGAGVG LGIMSGGRLL KGRSGLAGEI
241 GHFTAVSEGG RRCGCGNTGC LETVASDSAL AWLASKKLGR PVAVDEVVEL AKSGSVDLRA
301 ELREVAGFVA VGVAAVINLF NPATVFIHTP LFEIDAALFD LVVSKTRARA LPPSFADCNI
361 VQAKGSKQQG AVAGIIQHLT DSVAPELV
//