LOCUS VTS02487.1 373 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana Putative regulatory subunit (Fragment)
OS=Gemmata sp. Wa1-1 PE=4 SV=1: LRR_6: LRR_6 protein.
ACCESSION LR593886-8092
PROTEIN_ID VTS02487.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_75000"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|Q5EUH2|Q5EUH2_9PLAN ;
ALN/Q_length_ratio=0.670 ; DESCRIPTION=Putative regulatory
subunit (Fragment) OS=Gemmata sp. Wa1-1 PE=4 SV=1 ;
EVALUE=3e-51 ; Q/S_length_ratio=0.678"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|Q5EUG5|Q5EUG5_9PLAN ;
ALN/Q_length_ratio=0.528 ; DESCRIPTION=Putative regulatory
subunit (Fragment) OS=Gemmata sp. Wa1-1 PE=4 SV=1 ;
EVALUE=3e-45 ; Q/S_length_ratio=0.928"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|Q5EUG8|Q5EUG8_9PLAN ;
ALN/Q_length_ratio=0.576 ; DESCRIPTION=Putative regulatory
subunit OS=Gemmata sp. Wa1-1 PE=4 SV=1 ; EVALUE=6e-40 ;
Q/S_length_ratio=1.492"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A0A090KN24|A0A090KN24_9BACT ;
ALN/Q_length_ratio=0.563 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=8e-38 ;
Q/S_length_ratio=0.739"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|X0WFT9|X0WFT9_9ZZZZ ;
ALN/Q_length_ratio=0.469 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_S34318 (Fragment) OS=marine
sediment metagenome GN=S01H1_73467 PE=4 SV=1 ;
EVALUE=5e-32 ; Q/S_length_ratio=1.554"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|X0ULZ2|X0ULZ2_9ZZZZ ;
ALN/Q_length_ratio=0.448 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_S10406 (Fragment) OS=marine
sediment metagenome GN=S01H1_39834 PE=4 SV=1 ;
EVALUE=1e-31 ; Q/S_length_ratio=1.392"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|X0YYL4|X0YYL4_9ZZZZ ;
ALN/Q_length_ratio=0.475 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_S27651 (Fragment) OS=marine
sediment metagenome GN=S01H1_64373 PE=4 SV=1 ;
EVALUE=7e-31 ; Q/S_length_ratio=1.615"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5VVI8|M5VVI8_PRUPE ;
ALN/Q_length_ratio=0.501 ; DESCRIPTION=Uncharacterized
protein OS=Prunus persica GN=PRUPE_ppa003392mg PE=4 SV=1 ;
EVALUE=7e-29 ; Q/S_length_ratio=0.645"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A6C325|A6C325_9PLAN ;
ALN/Q_length_ratio=0.705 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_09949
PE=4 SV=1 ; EVALUE=4e-28 ; Q/S_length_ratio=0.691"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|B2LUQ9|B2LUQ9_MALDO ;
ALN/Q_length_ratio=0.509 ; DESCRIPTION=F-box-containing
protein 1 OS=Malus domestica PE=2 SV=1 ; EVALUE=9e-28 ;
Q/S_length_ratio=0.643"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A6C2X8|A6C2X8_9PLAN ;
ALN/Q_length_ratio=0.638 ; DESCRIPTION=Leucine-rich repeat
domain protein OS=Planctomyces maris DSM 8797
GN=PM8797T_09714 PE=4 SV=1 ; EVALUE=9e-28 ;
Q/S_length_ratio=1.207"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A068UPL3|A0A068UPL3_COFCA ;
ALN/Q_length_ratio=0.461 ; DESCRIPTION=Coffea canephora
DH200=94 genomic scaffold, scaffold_45 OS=Coffea canephora
GN=GSCOC_T00031235001 PE=4 SV=1 ; EVALUE=6e-27 ;
Q/S_length_ratio=0.644"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A6C329|A6C329_9PLAN ;
ALN/Q_length_ratio=0.536 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_09969
PE=4 SV=1 ; EVALUE=1e-26 ; Q/S_length_ratio=1.078"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|V4SJB3|V4SJB3_9ROSI ;
ALN/Q_length_ratio=0.601 ; DESCRIPTION=Uncharacterized
protein OS=Citrus clementina GN=CICLE_v10025249mg PE=4
SV=1 ; EVALUE=3e-26 ; Q/S_length_ratio=0.705"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|J3LZC3|J3LZC3_ORYBR ;
ALN/Q_length_ratio=0.584 ; DESCRIPTION=Uncharacterized
protein OS=Oryza brachyantha GN=OB04G24980 PE=4 SV=1 ;
EVALUE=3e-26 ; Q/S_length_ratio=0.642"
/note="Pfam_scan:hit_1 (187..210); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:22; HMM_Length:24;
EVALUE:0.11; BITSCORE: 12.6"
/note="Pfam_scan:hit_2 (235..258); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:21; HMM_Length:24;
EVALUE:0.14; BITSCORE: 12.3"
BEGIN
1 MTVRTRSFAL LFALIFVLVP SGGAWGRAAP VPKAPKPSLP SSEQLKEAKE AFAKLGGEHR
61 ERRLSGERGT VHTFSLPRTA DDGVLRSVPN LPFAFGLNLS YTRVTDSGLK ELERLTHLAS
121 LHLDCTDVSD QGLRELKALT NLTELNLRSI EVTDRGLAEL KGLTNLSVLG LFGTDVTDAG
181 LKELKGLTKL TSLELGSTKV TDRGLKELGG FTQLSVLGLF GTKVTDVGLA ELKGLTNLAE
241 LNLRSTDVTD KGLKELRGLT HLTELNLRST EGPHPPYRIE PPINERNGRG AQSARHRATS
301 VQTHRGIVDR FTRTVETHYA HDFSMARVSR MACTTVPGSA LWNAAARIGV HPRARTGKCG
361 HATKLYPTML CFR
//