LOCUS VTS02409.1 410 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rnd family efflux transporter mfp subunit
: RND family efflux transporter, MFP subunit OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_6016 PE=4 SV=1: HlyD protein.
ACCESSION LR593886-8066
PROTEIN_ID VTS02409.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_75260"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DLK6|L0DLK6_SINAD ;
ALN/Q_length_ratio=0.939 ; DESCRIPTION=RND family efflux
transporter, MFP subunit OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_6016 PE=4 SV=1 ; EVALUE=1e-104 ;
Q/S_length_ratio=0.981"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D5SNK5|D5SNK5_PLAL2 ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Planctomyces limnophilus
(strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
GN=Plim_2293 PE=4 SV=1 ; EVALUE=3e-95 ;
Q/S_length_ratio=0.953"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0DGV8|L0DGV8_SINAD ;
ALN/Q_length_ratio=0.880 ; DESCRIPTION=RND family efflux
transporter, MFP subunit OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_3860 PE=4 SV=1 ; EVALUE=1e-81 ;
Q/S_length_ratio=1.010"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|B0UHH1|B0UHH1_METS4 ;
ALN/Q_length_ratio=0.920 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Methylobacterium sp. (strain
4-46) GN=M446_5071 PE=4 SV=1 ; EVALUE=9e-70 ;
Q/S_length_ratio=1.088"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A0A3ZTF4|A0A0A3ZTF4_9ENTR ;
ALN/Q_length_ratio=0.932 ; DESCRIPTION=Acriflavin
resistance protein AcrA OS=Erwinia typographi
GN=NG99_20320 PE=4 SV=1 ; EVALUE=4e-68 ;
Q/S_length_ratio=1.068"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|B8IML4|B8IML4_METNO ;
ALN/Q_length_ratio=0.920 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Methylobacterium nodulans
(strain ORS2060 / LMG 21967) GN=Mnod_5362 PE=4 SV=1 ;
EVALUE=6e-68 ; Q/S_length_ratio=1.088"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|D8MRX1|D8MRX1_ERWBE ;
ALN/Q_length_ratio=0.902 ; DESCRIPTION=OqxA
membrane-fusion protein OS=Erwinia billingiae (strain
Eb661) GN=oqxA PE=4 SV=1 ; EVALUE=1e-67 ;
Q/S_length_ratio=1.059"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|Q3JA50|Q3JA50_NITOC ;
ALN/Q_length_ratio=0.941 ; DESCRIPTION=Secretion protein
HlyD OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB
11848) GN=Noc_1828 PE=4 SV=1 ; EVALUE=4e-67 ;
Q/S_length_ratio=1.010"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A086XB26|A0A086XB26_9GAMM ;
ALN/Q_length_ratio=0.941 ; DESCRIPTION=Secretion protein
HlyD OS=Nitrosococcus oceani C-27 GN=IB75_09720 PE=4 SV=1
; EVALUE=4e-67 ; Q/S_length_ratio=1.010"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A086XKB3|A0A086XKB3_9GAMM ;
ALN/Q_length_ratio=0.941 ; DESCRIPTION=Secretion protein
HlyD OS=Nitrosococcus oceani GN=HW44_09145 PE=4 SV=1 ;
EVALUE=4e-67 ; Q/S_length_ratio=1.010"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|B6BXP5|B6BXP5_9GAMM ;
ALN/Q_length_ratio=0.941 ; DESCRIPTION=Auxiliary transport
protein, MFP family, putative OS=Nitrosococcus oceani
AFC27 GN=NOC27_1907 PE=4 SV=1 ; EVALUE=4e-67 ;
Q/S_length_ratio=1.010"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|H2J290|H2J290_RAHAC ;
ALN/Q_length_ratio=0.929 ; DESCRIPTION=Membrane fusion
protein of RND family multidrug efflux pump OS=Rahnella
aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC
105701 / NCIMB 13365 / CIP 78.65) GN=Rahaq2_4972 PE=4 SV=1
; EVALUE=5e-67 ; Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|L0DRA3|L0DRA3_SINAD ;
ALN/Q_length_ratio=0.971 ; DESCRIPTION=RND family efflux
transporter, MFP subunit OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_7473 PE=4 SV=1 ; EVALUE=6e-67 ;
Q/S_length_ratio=0.969"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D8K5N5|D8K5N5_NITWC ;
ALN/Q_length_ratio=0.878 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Nitrosococcus watsoni (strain
C-113) GN=Nwat_1286 PE=4 SV=1 ; EVALUE=1e-66 ;
Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A085G0L8|A0A085G0L8_9ENTR ;
ALN/Q_length_ratio=0.910 ; DESCRIPTION=Membrane fusion
protein of RND family multidrug efflux pump OS=Ewingella
americana ATCC 33852 GN=GEAM_4389 PE=4 SV=1 ; EVALUE=3e-65
; Q/S_length_ratio=1.022"
/note="Pfam_scan:hit_1 (62..357); Pfam:PF00529.15:HlyD;
Pfam_type:Family;HMM_aln_Length:286; HMM_Length:305;
EVALUE:1e-25; BITSCORE: 90.7"
/note="GO_domain:GO:0055085"
/note="GO_domain:GO:0005575"
BEGIN
1 MINRRYAAAV AFVVAASVLA GCARKPPEPV KTPPPVVIVS SPLSQKVNDY EDFAGRTEPY
61 RVVELKSRVT GHLKKIHFKD GQDIEEGQPL FEIDSRIYRA QLDQATAALA KAEVHLKTAT
121 DNYDRVKGLY DKGSAAKEDY DIKAGDRAEA EGDVNVARAA VQLAATNLRY CTIRAPFDGR
181 LDKRFVDEEN LIKADDTALS TIVRLDYVYA TFDVDERTVS RVRKLIEQGA VKSSREHPRM
241 VQIALADDDT HTLSGQIVFS SNQIDAGTGT LRIRAEILNP RIPRAPWYML SPGQFVRVRM
301 PIGEPHDAIL VPEKALGSDQ GQKFLYIVNE KNEVVRRNVR VGQQYGQLRV IEDGAVKTSD
361 KVIVDGMLRV RPGAEVNPKP AQPTKTATTD SPGSLPLAPA PRVKSLSGSL
//