LOCUS VTS02049.1 308 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana xylose isomerase : Uncharacterized
protein OS=Blastopirellula marina DSM 3645 GN=DSM3645_15790
PE=4 SV=1: AP_endonuc_2 protein.
ACCESSION LR593886-7946
PROTEIN_ID VTS02049.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_76460"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A4A2Z8|A4A2Z8_9PLAN ;
ALN/Q_length_ratio=0.886 ; DESCRIPTION=Uncharacterized
protein OS=Blastopirellula marina DSM 3645
GN=DSM3645_15790 PE=4 SV=1 ; EVALUE=1e-149 ;
Q/S_length_ratio=0.969"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D2R4K9|D2R4K9_PIRSD ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Pirellula staleyi (strain
ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_2405 PE=4 SV=1
; EVALUE=1e-145 ; Q/S_length_ratio=0.954"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|M5RP33|M5RP33_9PLAN ;
ALN/Q_length_ratio=0.938 ; DESCRIPTION=Xylose
isomerase-type TIM barrel domain protein OS=Rhodopirellula
maiorica SM1 GN=RMSM_01969 PE=4 SV=1 ; EVALUE=1e-135 ;
Q/S_length_ratio=1.058"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5SC55|M5SC55_9PLAN ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Rhodopirellula europaea SH398
GN=RESH_00341 PE=4 SV=1 ; EVALUE=1e-134 ;
Q/S_length_ratio=0.909"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|K5DAR0|K5DAR0_RHOBT ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Rhodopirellula baltica SH28
GN=RBSH_05105 PE=4 SV=1 ; EVALUE=1e-133 ;
Q/S_length_ratio=0.909"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|L7CIN9|L7CIN9_RHOBT ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Rhodopirellula baltica SWK14
GN=RBSWK_02647 PE=4 SV=1 ; EVALUE=1e-132 ;
Q/S_length_ratio=0.909"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|F2AT75|F2AT75_RHOBT ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Rhodopirellula baltica WH47
GN=RBWH47_01809 PE=4 SV=1 ; EVALUE=1e-132 ;
Q/S_length_ratio=0.909"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M2AXT1|M2AXT1_9PLAN ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Rhodopirellula europaea 6C
GN=RE6C_04770 PE=4 SV=1 ; EVALUE=1e-132 ;
Q/S_length_ratio=0.909"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|Q7UNT9|Q7UNT9_RHOBA ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Putative
uncharacterized protein OS=Rhodopirellula baltica (strain
SH1) GN=RB7382 PE=4 SV=1 ; EVALUE=1e-132 ;
Q/S_length_ratio=0.856"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A4ATJ9|A4ATJ9_MARSH ;
ALN/Q_length_ratio=1.026 ; DESCRIPTION=Uncharacterized
protein OS=Maribacter sp. (strain HTCC2170 / KCCM 42371)
GN=FB2170_16831 PE=4 SV=1 ; EVALUE=1e-128 ;
Q/S_length_ratio=0.957"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|I2GH60|I2GH60_9BACT ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Fibrisoma limi BUZ 3
GN=BN8_02314 PE=4 SV=1 ; EVALUE=1e-127 ;
Q/S_length_ratio=0.997"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|I2EQ84|I2EQ84_EMTOG ;
ALN/Q_length_ratio=1.006 ; DESCRIPTION=Xylose isomerase
domain-containing protein TIM barrel OS=Emticicia
oligotrophica (strain DSM 17448 / GPTSA100-15)
GN=Emtol_0684 PE=4 SV=1 ; EVALUE=1e-126 ;
Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F8EHT7|F8EHT7_RUNSL ;
ALN/Q_length_ratio=0.987 ; DESCRIPTION=Xylose isomerase
domain-containing protein TIM barrel OS=Runella
slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /
NCIMB 11436 / LSU 4) GN=Runsl_3999 PE=4 SV=1 ;
EVALUE=1e-126 ; Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|L0DLS0|L0DLS0_SINAD ;
ALN/Q_length_ratio=1.045 ; DESCRIPTION=Sugar phosphate
isomerase/epimerase OS=Singulisphaera acidiphila (strain
ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_6231 PE=4 SV=1 ; EVALUE=1e-122 ;
Q/S_length_ratio=0.957"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|D5SUG2|D5SUG2_PLAL2 ;
ALN/Q_length_ratio=0.916 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Planctomyces limnophilus
(strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
GN=Plim_3402 PE=4 SV=1 ; EVALUE=1e-120 ;
Q/S_length_ratio=0.951"
/note="Pfam_scan:hit_1 (58..305);
Pfam:PF01261.19:AP_endonuc_2;
Pfam_type:Domain;HMM_aln_Length:194; HMM_Length:213;
EVALUE:4.8e-29; BITSCORE: 101.1"
/note="GO_domain:GO:0008150"
/note="GO_domain:GO:0003674"
BEGIN
1 MLTDRRRFLA ASAALAVVPT ADARAAEPPK VRPIRIGIST YSFWQFKNNK LRDVETCIDL
61 AGEMGFDAVE VLHRQMTDES PAALQKIKRR AFLNGMGLCG FSIHQGFVYS DKAERQKNID
121 HTIKCLEMCY AMGIPTMRLN TGRWGTTKSF DDLMKNRGIE PNLPGFTDDD GFKWVIDSIQ
181 SCLKTAEKCG VVMGLENHWG LGRTPEGVLK IVDAVNSPWL QVTMDTGNFL EDPYDRLEKM
241 APKTVLVQAK TYYGGGLWYT LDLDNERIAK MLRKHKYNGF VSLEFEGKED PHTGVPKSLA
301 ALRKAFAV
//