LOCUS VTS01834.1 449 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana chemotaxis protein : Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 /
IS1B) GN=Isop_2814 PE=4 SV=1: Response_reg: Sigma54_activat:
HTH_8 protein.
ACCESSION LR593886-7875
PROTEIN_ID VTS01834.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_77170"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DQY4|L0DQY4_SINAD ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6756 PE=4 SV=1
; EVALUE=0.0 ; Q/S_length_ratio=0.879"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|E8R129|E8R129_ISOPI ;
ALN/Q_length_ratio=1.004 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 /
IS1B) GN=Isop_2814 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.980"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|E3FM27|E3FM27_STIAD ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=Sigma-54 dependent
DNA-binding response regulator OS=Stigmatella aurantiaca
(strain DW4/3-1) GN=STAUR_0222 PE=4 SV=1 ; EVALUE=1e-143 ;
Q/S_length_ratio=0.961"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|L7VZS2|L7VZS2_9BACT ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=Response regulator
of zinc sigma-54-dependent two-component system
OS=uncultured bacterium A1Q1_fos_2386 PE=4 SV=1 ;
EVALUE=1e-141 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A084ST79|A0A084ST79_9DELT ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=Chemotaxis protein
CheY OS=Cystobacter violaceus Cb vi76 GN=Q664_20595 PE=4
SV=1 ; EVALUE=1e-141 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L7U4T9|L7U4T9_MYXSD ;
ALN/Q_length_ratio=0.978 ; DESCRIPTION=Sigma-54 dependent
DNA-binding response regulator OS=Myxococcus stipitatus
(strain DSM 14675 / JCM 12634 / Mx s8) GN=MYSTI_00160 PE=4
SV=1 ; EVALUE=1e-140 ; Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|U2SJ64|U2SJ64_9DELT ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=Response regulator
of zinc sigma-54-dependent two-component system
OS=Myxococcus sp. (contaminant ex DSM 436) GN=A176_07338
PE=4 SV=1 ; EVALUE=1e-139 ; Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|H8MWB5|H8MWB5_CORCM ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=Sigma-54 dependent
DNA-binding response regulator OS=Corallococcus
coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 /
M2) GN=algB PE=4 SV=1 ; EVALUE=1e-139 ;
Q/S_length_ratio=1.009"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A085WL30|A0A085WL30_9DELT ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=Response regulator
of zinc sigma-54-dependent two-component system
OS=Hyalangium minutum GN=DB31_7630 PE=4 SV=1 ;
EVALUE=1e-138 ; Q/S_length_ratio=0.974"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|Q1DFW8|Q1DFW8_MYXXD ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=Sigma-54 dependent
DNA-binding response regulator OS=Myxococcus xanthus
(strain DK 1622) GN=MXAN_0172 PE=4 SV=1 ; EVALUE=1e-138 ;
Q/S_length_ratio=0.991"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A085XDB9|A0A085XDB9_9DELT ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=Response regulator
of zinc sigma-54-dependent two-component system
OS=Enhygromyxa salina GN=DB30_3382 PE=4 SV=1 ;
EVALUE=1e-138 ; Q/S_length_ratio=0.974"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|S9PPI8|S9PPI8_9DELT ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=Response regulator
of zinc sigma-54-dependent two-component system
OS=Cystobacter fuscus DSM 2262 GN=D187_005531 PE=4 SV=1 ;
EVALUE=1e-137 ; Q/S_length_ratio=0.976"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|B9XIV9|B9XIV9_PEDPL ;
ALN/Q_length_ratio=0.989 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD3245
PE=4 SV=1 ; EVALUE=1e-136 ; Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A090KM98|A0A090KM98_9BACT ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=1e-133 ;
Q/S_length_ratio=1.023"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|L0DHZ7|L0DHZ7_SINAD ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Response regulator
with CheY-like receiver, AAA-type ATPase, and DNA-binding
domains OS=Singulisphaera acidiphila (strain ATCC BAA-1392
/ DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4685 PE=4 SV=1
; EVALUE=1e-133 ; Q/S_length_ratio=1.004"
/note="Pfam_scan:hit_1 (11..121);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:109; HMM_Length:112;
EVALUE:2.1e-23; BITSCORE: 82.4"
/note="Pfam_scan:hit_2 (149..316);
Pfam:PF00158.21:Sigma54_activat;
Pfam_type:Domain;HMM_aln_Length:162; HMM_Length:168;
EVALUE:1.7e-58; BITSCORE: 196.7"
/note="Pfam_scan:hit_3 (406..446); Pfam:PF02954.14:HTH_8;
Pfam_type:Domain;HMM_aln_Length:41; HMM_Length:42;
EVALUE:6.3e-08; BITSCORE: 32.0"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0007165"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0008134"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MVTATELSWS ALVIDDDPAI RQSIRLCLEA ENARVQHVGT PAGALDALDR SRFDVVVLDL
61 WLGSESGLTV LPEILRRQPG AGVIVVTAFA TYESAVEAMK LGAVDYLPKP FTPEQVRTAA
121 RRVVTAGVLK RQLTELQDRL EESESESSFE TCSPAYATFL QTVARAAASD AGVLLRGASG
181 TGKTVLARWV RRHSRRPDGP FVTVHCPLLS NELMSSVLFG HKKGAFTGAV TDTVGKVEEA
241 EGGTLFLDEV GDLNADAQAR LLRFLNDRTY ERVGEARERR ADVRLIAATN RALEADVRDG
301 RFREDLFFRL NVITLTAPAL RDRREDVLPM ARHYLNFFER RQGRNLAFSP ACEAAIAAHP
361 WPGNLRELRN GVERAVILCP AAVIEAADLG LAPARGPGLE LGADVSLEEI EREHIARVVA
421 RAGSFEAAAR VLGIDVTTLQ RKRKRYGVS
//