LOCUS VTS01813.1 405 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana Efflux transporter, RND family, MFP
subunit OS=Isosphaera pallida (strain ATCC 43644 / DSM
9630 / IS1B) GN=Isop_0340 PE=4 SV=1: HlyD_2 protein.
ACCESSION LR593886-7868
PROTEIN_ID VTS01813.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_77240"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|E8QXV6|E8QXV6_ISOPI ;
ALN/Q_length_ratio=0.906 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Isosphaera pallida (strain ATCC
43644 / DSM 9630 / IS1B) GN=Isop_0340 PE=4 SV=1 ;
EVALUE=1e-143 ; Q/S_length_ratio=0.871"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|Q605F9|Q605F9_METCA ;
ALN/Q_length_ratio=0.889 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Methylococcus capsulatus
(strain ATCC 33009 / NCIMB 11132 / Bath) GN=MCA2325 PE=4
SV=1 ; EVALUE=1e-102 ; Q/S_length_ratio=1.041"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|H8GKU4|H8GKU4_METAL ;
ALN/Q_length_ratio=0.864 ; DESCRIPTION=RND family efflux
transporter, MFP subunit OS=Methylomicrobium album BG8
GN=Metal_1481 PE=4 SV=1 ; EVALUE=1e-97 ;
Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|V5BLF6|V5BLF6_9GAMM ;
ALN/Q_length_ratio=0.593 ; DESCRIPTION=RND family efflux
transporter, MFP subunit OS=Methyloglobulus morosus KoM1
GN=MGMO_2c00150 PE=4 SV=1 ; EVALUE=8e-68 ;
Q/S_length_ratio=1.122"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|H8XUI2|H8XUI2_FLAIG ;
ALN/Q_length_ratio=0.647 ; DESCRIPTION=Probable membrane
fusion efflux lipoprotein OS=Flavobacterium indicum
(strain DSM 17447 / CIP 109464 / GPTSA100-9) GN=KQS_04995
PE=4 SV=1 ; EVALUE=6e-25 ; Q/S_length_ratio=1.209"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|I2F0V8|I2F0V8_EMTOG ;
ALN/Q_length_ratio=0.664 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Emticicia oligotrophica (strain
DSM 17448 / GPTSA100-15) GN=Emtol_0291 PE=4 SV=1 ;
EVALUE=8e-24 ; Q/S_length_ratio=1.141"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A5FBD5|A5FBD5_FLAJ1 ;
ALN/Q_length_ratio=0.674 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Flavobacterium johnsoniae
(strain ATCC 17061 / DSM 2064 / UW101) GN=Fjoh_4484 PE=4
SV=1 ; EVALUE=5e-22 ; Q/S_length_ratio=1.205"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|T0HU40|T0HU40_9SPHN ;
ALN/Q_length_ratio=0.341 ; DESCRIPTION=Uncharacterized
protein (Fragment) OS=Sphingobium baderi LL03
GN=L485_11800 PE=4 SV=1 ; EVALUE=8e-22 ;
Q/S_length_ratio=1.494"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|T0HSY7|T0HSY7_9SPHN ;
ALN/Q_length_ratio=0.578 ; DESCRIPTION=RND transporter
OS=Novosphingobium lindaniclasticum LE124 GN=L284_01500
PE=4 SV=1 ; EVALUE=2e-21 ; Q/S_length_ratio=0.817"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F6F408|F6F408_SPHCR ;
ALN/Q_length_ratio=0.578 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Sphingobium chlorophenolicum
L-1 GN=Sphch_4088 PE=4 SV=1 ; EVALUE=3e-21 ;
Q/S_length_ratio=0.817"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A081RHJ7|A0A081RHJ7_SPHCR ;
ALN/Q_length_ratio=0.578 ; DESCRIPTION=RND transporter
OS=Sphingobium chlorophenolicum GN=BV95_00899 PE=4 SV=1 ;
EVALUE=3e-21 ; Q/S_length_ratio=0.817"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|T0KCR1|T0KCR1_9SPHN ;
ALN/Q_length_ratio=0.578 ; DESCRIPTION=RND transporter
OS=Sphingobium ummariense RL-3 GN=M529_15600 PE=4 SV=1 ;
EVALUE=3e-21 ; Q/S_length_ratio=0.817"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|D4YYC6|D4YYC6_SPHJU ;
ALN/Q_length_ratio=0.578 ; DESCRIPTION=Copper efflux
system membrane protein CusB OS=Sphingobium japonicum
(strain NBRC 101211 / UT26S) GN=cusB PE=4 SV=1 ;
EVALUE=3e-21 ; Q/S_length_ratio=0.817"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|W1KL07|W1KL07_9SPHN ;
ALN/Q_length_ratio=0.578 ; DESCRIPTION=RND transporter
OS=Sphingobium chinhatense IP26 GN=M527_03530 PE=4 SV=1 ;
EVALUE=3e-21 ; Q/S_length_ratio=0.817"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|G2ITW5|G2ITW5_9SPHN ;
ALN/Q_length_ratio=0.578 ; DESCRIPTION=Copper efflux
system membrane protein CusB OS=Sphingobium sp. SYK-6
GN=SLG_p_00520 PE=4 SV=1 ; EVALUE=3e-21 ;
Q/S_length_ratio=0.817"
/note="Pfam_scan:hit_1 (127..380); Pfam:PF12700.2:HlyD_2;
Pfam_type:Family;HMM_aln_Length:220; HMM_Length:328;
EVALUE:3.4e-10; BITSCORE: 39.5"
BEGIN
1 MTGNLSDAPA PAPPPPPPAP PGSVWKRVRS VAQFVVALAG TTAFLAYLLF APAAPPPEPA
61 ANPRPAADVV EVVGPGLIRV QPGSPLDSKI QVGAARRQTI TDAVITVTGR VAASLRPGNG
121 KGNDFWQFDS PEVLTAYTDW QKGQADITFA EAQLASAKQL AAARLDAQKQ VVARLEKLVT
181 AGTDTAKDLA AERANLIQAE ITGRKEVHEA ETAVRTAHRS EAAAAKQLQQ AGLAPELLRS
241 TSADVDIVLA DVPEARLNRV QVGQGCQAAF FGIPNERFGG KVTSIAPVLS KERRSLRVLF
301 VIHDPNDKLR PGMFAEIGLG TDPRDALLVP ADGVLHIGRS DYVLAGAEAN TWRVVEVQIG
361 EPHNGDVEIL DGLKDGERLV GKGAILFKPL VVRALQPPTG KEGGR
//