LOCUS VTS01798.1 474 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana carbohydrate-selective porin : Carbohydrate-
selective porin OprB OS=Pedosphaera parvula (strain Ellin514)
GN=Cflav_PD0649 PE=4 SV=1: OprB protein.
ACCESSION LR593886-7863
PROTEIN_ID VTS01798.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_77290"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|B9XQZ0|B9XQZ0_PEDPL ;
ALN/Q_length_ratio=0.859 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Pedosphaera parvula (strain Ellin514) GN=Cflav_PD0649
PE=4 SV=1 ; EVALUE=1e-116 ; Q/S_length_ratio=1.049"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D5SZ12|D5SZ12_PLAL2 ;
ALN/Q_length_ratio=0.825 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776
/ IFAM 1008 / 290) GN=Plim_4102 PE=4 SV=1 ; EVALUE=1e-96 ;
Q/S_length_ratio=0.908"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0DGZ8|L0DGZ8_SINAD ;
ALN/Q_length_ratio=0.895 ;
DESCRIPTION=Carbohydrate-selective porin OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_4340 PE=4 SV=1 ; EVALUE=9e-83 ;
Q/S_length_ratio=0.969"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5TQT9|M5TQT9_9PLAN ;
ALN/Q_length_ratio=0.711 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Rhodopirellula sp. SWK7 GN=RRSWK_01370 PE=4 SV=1 ;
EVALUE=3e-80 ; Q/S_length_ratio=1.390"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A6C291|A6C291_9PLAN ;
ALN/Q_length_ratio=0.876 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_03109
PE=4 SV=1 ; EVALUE=3e-80 ; Q/S_length_ratio=0.983"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L0DK95|L0DK95_SINAD ;
ALN/Q_length_ratio=0.802 ;
DESCRIPTION=Carbohydrate-selective porin OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_5108 PE=4 SV=1 ; EVALUE=4e-78 ;
Q/S_length_ratio=1.035"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A3ZR18|A3ZR18_9PLAN ;
ALN/Q_length_ratio=0.821 ; DESCRIPTION=Uncharacterized
protein OS=Blastopirellula marina DSM 3645
GN=DSM3645_21107 PE=4 SV=1 ; EVALUE=9e-76 ;
Q/S_length_ratio=1.123"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5TX98|M5TX98_9PLAN ;
ALN/Q_length_ratio=0.793 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Rhodopirellula sallentina SM41 GN=RSSM_04703 PE=4 SV=1
; EVALUE=5e-74 ; Q/S_length_ratio=1.058"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M5SAZ4|M5SAZ4_9PLAN ;
ALN/Q_length_ratio=0.789 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Rhodopirellula europaea SH398 GN=RESH_00635 PE=4 SV=1 ;
EVALUE=7e-73 ; Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M2AA35|M2AA35_9PLAN ;
ALN/Q_length_ratio=0.789 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Rhodopirellula europaea 6C GN=RE6C_05995 PE=4 SV=1 ;
EVALUE=8e-73 ; Q/S_length_ratio=0.977"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|F2AK80|F2AK80_RHOBT ;
ALN/Q_length_ratio=0.789 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Rhodopirellula baltica WH47 GN=RBWH47_03866 PE=4 SV=1 ;
EVALUE=1e-72 ; Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|Q7ULG9|Q7ULG9_RHOBA ;
ALN/Q_length_ratio=0.789 ; DESCRIPTION=Putative
uncharacterized protein OS=Rhodopirellula baltica (strain
SH1) GN=RB9508 PE=4 SV=1 ; EVALUE=2e-72 ;
Q/S_length_ratio=0.977"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|L7C7G4|L7C7G4_RHOBT ;
ALN/Q_length_ratio=0.789 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Rhodopirellula baltica SWK14 GN=RBSWK_06478 PE=4 SV=1 ;
EVALUE=5e-72 ; Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|K5DCT7|K5DCT7_RHOBT ;
ALN/Q_length_ratio=0.789 ;
DESCRIPTION=Carbohydrate-selective porin OprB
OS=Rhodopirellula baltica SH28 GN=RBSH_04091 PE=4 SV=1 ;
EVALUE=8e-72 ; Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A090MHU1|A0A090MHU1_9BACT ;
ALN/Q_length_ratio=0.903 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=6e-71 ;
Q/S_length_ratio=1.058"
/note="Pfam_scan:hit_1 (116..474); Pfam:PF04966.7:OprB;
Pfam_type:Family;HMM_aln_Length:366; HMM_Length:371;
EVALUE:8.1e-30; BITSCORE: 104.1"
/note="GO_domain:GO:0005575"
/note="GO_domain:GO:0006810"
/note="GO_domain:GO:0003674"
BEGIN
1 MRADFRQVVI ASVVLLFSGA LAFGQYPQAV TPGPNSVPVA VEGPSQGTTA PTPSEPAGTV
61 ATEPVPPANP YAGDLFSRAR LTGDWWGARS ALANRGLTFD LFATQFYQGV TAGGNERAWE
121 YGGKLDYLFN VDGQKLGLWK GLFLNMHAET RYGTDLNGID GLIAPSNIAM NFPDATTSIT
181 SITGLKLTQA LSENFAVYAG KINTLDEYPL RYSPGLGTNK PGLEGFQNTS LVFNPIVART
241 IPYAAAGAGF AVLKDLEPVF TFTVFDPEER ATSGLQNLYD RGVVLVPDLV LRTKFLDRPG
301 AYNFGGTYST AKYRSFDPAA YLNIPFLRSL VARNPATPLE TGSWSVYANF YQSIWVDELD
361 EKRNWGLFGQ FGISDGNPNP VRFVANGGIG GRSMIPGRKL DTFGVGYYYL GLSDNFKALA
421 RPFTPQRDEH GVELFYNYAI TPWCRLTYDF QVATPSTINV NTTITTGLRL QILF
//