LOCUS VTS01768.1 430 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana integrase-recombinase protein : Site-
specific recombinase XerD OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_4560 PE=4 SV=1: Phage_integrase protein.
ACCESSION LR593886-7853
PROTEIN_ID VTS01768.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_77390"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DJ84|L0DJ84_SINAD ;
ALN/Q_length_ratio=0.821 ; DESCRIPTION=Site-specific
recombinase XerD OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4560
PE=4 SV=1 ; EVALUE=6e-28 ; Q/S_length_ratio=1.111"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A090KMF3|A0A090KMF3_9BACT ;
ALN/Q_length_ratio=1.049 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=8e-21 ;
Q/S_length_ratio=0.692"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|M5TSZ5|M5TSZ5_9PLAN ;
ALN/Q_length_ratio=1.077 ; DESCRIPTION=Site-specific
recombinase, phage integrase family protein
OS=Rhodopirellula sallentina SM41 GN=RSSM_06380 PE=4 SV=1
; EVALUE=1e-20 ; Q/S_length_ratio=0.811"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Q7UJ13|Q7UJ13_RHOBA ;
ALN/Q_length_ratio=1.049 ; DESCRIPTION=Probable
integrase-recombinase protein OS=Rhodopirellula baltica
(strain SH1) GN=RB12202 PE=4 SV=1 ; EVALUE=1e-19 ;
Q/S_length_ratio=0.795"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|M5R6X7|M5R6X7_9PLAN ;
ALN/Q_length_ratio=1.056 ; DESCRIPTION=Integrase,
catalytic core, phage domain protein OS=Rhodopirellula
maiorica SM1 GN=RMSM_07826 PE=4 SV=1 ; EVALUE=4e-19 ;
Q/S_length_ratio=0.810"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L7CAI7|L7CAI7_RHOBT ;
ALN/Q_length_ratio=1.049 ;
DESCRIPTION=Integrase-recombinase protein
OS=Rhodopirellula baltica SWK14 GN=RBSWK_05106 PE=4 SV=1 ;
EVALUE=6e-19 ; Q/S_length_ratio=0.758"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|X1LRV7|X1LRV7_9ZZZZ ;
ALN/Q_length_ratio=0.595 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S06H3_L02821 (Fragment) OS=marine
sediment metagenome GN=S06H3_17168 PE=4 SV=1 ;
EVALUE=2e-18 ; Q/S_length_ratio=1.575"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5TYC8|M5TYC8_9PLAN ;
ALN/Q_length_ratio=0.926 ;
DESCRIPTION=Integrase-recombinase protein
OS=Rhodopirellula sallentina SM41 GN=RSSM_04495 PE=4 SV=1
; EVALUE=1e-17 ; Q/S_length_ratio=1.024"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M5TZQ5|M5TZQ5_9PLAN ;
ALN/Q_length_ratio=1.028 ;
DESCRIPTION=Integrase-recombinase protein
OS=Rhodopirellula sallentina SM41 GN=RSSM_03803 PE=4 SV=1
; EVALUE=2e-15 ; Q/S_length_ratio=0.835"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|B5JL57|B5JL57_9BACT ;
ALN/Q_length_ratio=0.765 ; DESCRIPTION=Site-specific
recombinase, phage integrase family protein
OS=Verrucomicrobiae bacterium DG1235 GN=VDG1235_705 PE=4
SV=1 ; EVALUE=6e-14 ; Q/S_length_ratio=1.005"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|X0ZHI7|X0ZHI7_9ZZZZ ;
ALN/Q_length_ratio=0.386 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H4_L00480 OS=marine sediment
metagenome GN=S01H4_14198 PE=4 SV=1 ; EVALUE=1e-11 ;
Q/S_length_ratio=1.536"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M5SU81|M5SU81_9PLAN ;
ALN/Q_length_ratio=0.635 ; DESCRIPTION=Tyrosine
recombinase XerD OS=Rhodopirellula sp. SWK7 GN=RRSWK_06961
PE=4 SV=1 ; EVALUE=5e-10 ; Q/S_length_ratio=0.937"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|X0SNN7|X0SNN7_9ZZZZ ;
ALN/Q_length_ratio=0.351 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_L00378 OS=marine sediment
metagenome GN=S01H1_04139 PE=4 SV=1 ; EVALUE=7e-10 ;
Q/S_length_ratio=1.525"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|X0XHQ9|X0XHQ9_9ZZZZ ;
ALN/Q_length_ratio=0.409 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_S28344 (Fragment) OS=marine
sediment metagenome GN=S01H1_65329 PE=4 SV=1 ;
EVALUE=7e-10 ; Q/S_length_ratio=1.713"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A8UVD2|A8UVD2_9AQUI ;
ALN/Q_length_ratio=0.342 ; DESCRIPTION=Phage integrase
family protein OS=Hydrogenivirga sp. 128-5-R1-1
GN=HG1285_16281 PE=4 SV=1 ; EVALUE=2e-09 ;
Q/S_length_ratio=1.191"
/note="Pfam_scan:hit_1 (230..410);
Pfam:PF00589.17:Phage_integrase;
Pfam_type:Family;HMM_aln_Length:165; HMM_Length:173;
EVALUE:1.3e-15; BITSCORE: 57.5"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0006259"
BEGIN
1 MAHVHKQTFT KAIPTGAERV TIKGRACVRW RGRTKNWQVG ELIPDKPGRC RIESSKWYVT
61 YFDPSVNDTR TVPGYADRAA TDALMVTLVR TAERVDAGVL PKEAARPRLT LPELLDRWHR
121 YVRHSGASED GARRQWRRAQ DVCDGLKVTR VSELTPTTVL DWIGTQRVSG GRAPKGKQGK
181 GISSGTAANY IGAIKSFTRW CALVERCEAV DHLSALVKSR DPADLRHVRR ALMPVELDRL
241 LSAAQGSTEV IYGLTGTERH ALYLVACSTG LRATELSRLE PEHVDVTKNT VTVWRPAKTK
301 TRPADVLPLD ADVLKVLKPL LKGRGPLWPN RGKPTQAWWR VGARLVRHDL AAADLPAKDA
361 QGRVFDFHSL RGQFGTDLDR AGVSLVRAQK LMRHSTPDLT AKYYMRPESV EMAADVAKLK
421 RGRKGENRAS
//