LOCUS VTS01687.1 587 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana recombinase : Recombinase-related protein
OS=Pseudomonas putida (strain KT2440) GN=PP_1118 PE=4
SV=1: Resolvase: Recombinase protein.
ACCESSION LR593886-7826
PROTEIN_ID VTS01687.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_77660"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|Q88NT6|Q88NT6_PSEPK ;
ALN/Q_length_ratio=0.537 ; DESCRIPTION=Recombinase-related
protein OS=Pseudomonas putida (strain KT2440) GN=PP_1118
PE=4 SV=1 ; EVALUE=5e-59 ; Q/S_length_ratio=1.043"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|V9UP60|V9UP60_9PSED ;
ALN/Q_length_ratio=0.537 ; DESCRIPTION=Recombinase
OS=Pseudomonas monteilii SB3078 GN=X969_20345 PE=4 SV=1 ;
EVALUE=7e-59 ; Q/S_length_ratio=1.041"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|V9V5G6|V9V5G6_9PSED ;
ALN/Q_length_ratio=0.537 ; DESCRIPTION=Recombinase
OS=Pseudomonas monteilii SB3101 GN=X970_19980 PE=4 SV=1 ;
EVALUE=7e-59 ; Q/S_length_ratio=1.041"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|S2ET53|S2ET53_9PSED ;
ALN/Q_length_ratio=0.760 ; DESCRIPTION=Uncharacterized
protein OS=Pseudomonas sp. G5(2012) GN=PG5_45890 PE=4 SV=1
; EVALUE=4e-58 ; Q/S_length_ratio=0.887"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|Q1V893|Q1V893_VIBAL ;
ALN/Q_length_ratio=0.842 ; DESCRIPTION=Uncharacterized
protein OS=Vibrio alginolyticus 12G01 GN=V12G01_10296 PE=4
SV=1 ; EVALUE=5e-58 ; Q/S_length_ratio=1.067"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Q30XM6|Q30XM6_DESAG ;
ALN/Q_length_ratio=0.862 ; DESCRIPTION=Recombinase
OS=Desulfovibrio alaskensis (strain G20) GN=Dde_2774 PE=4
SV=2 ; EVALUE=8e-57 ; Q/S_length_ratio=0.933"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|G9A697|G9A697_RHIFH ;
ALN/Q_length_ratio=0.617 ; DESCRIPTION=Site-specific
recombinase OS=Rhizobium fredii (strain HH103)
GN=SFHH103_03916 PE=4 SV=1 ; EVALUE=8e-57 ;
Q/S_length_ratio=1.509"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A077F7Z7|A0A077F7Z7_9PSED ;
ALN/Q_length_ratio=0.537 ;
DESCRIPTION=Recombinase/resolvase OS=Pseudomonas
alkylphenolia GN=PSAKL28_11840 PE=4 SV=1 ; EVALUE=5e-56 ;
Q/S_length_ratio=1.039"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|K0WFQ9|K0WFQ9_9RHIZ ;
ALN/Q_length_ratio=0.835 ; DESCRIPTION=Site-specific
recombinase OS=Rhizobium sp. Pop5 GN=RCCGEPOP_06266 PE=4
SV=1 ; EVALUE=7e-56 ; Q/S_length_ratio=1.021"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|F7QH90|F7QH90_9BRAD ;
ALN/Q_length_ratio=0.738 ; DESCRIPTION=Site-specific
recombinase OS=Bradyrhizobiaceae bacterium SG-6C
GN=CSIRO_0917 PE=4 SV=1 ; EVALUE=2e-55 ;
Q/S_length_ratio=1.010"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|Q1QRV3|Q1QRV3_NITHX ;
ALN/Q_length_ratio=0.663 ; DESCRIPTION=Recombinase
OS=Nitrobacter hamburgensis (strain X14 / DSM 10229)
GN=Nham_0143 PE=4 SV=1 ; EVALUE=7e-55 ;
Q/S_length_ratio=1.039"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|K8NZI8|K8NZI8_9BRAD ;
ALN/Q_length_ratio=0.717 ; DESCRIPTION=Uncharacterized
protein OS=Afipia clevelandensis ATCC 49720
GN=HMPREF9696_03014 PE=4 SV=1 ; EVALUE=8e-55 ;
Q/S_length_ratio=1.010"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|H8EI21|H8EI21_CLOTM ;
ALN/Q_length_ratio=0.550 ; DESCRIPTION=Resolvase
domain-containing protein OS=Ruminiclostridium
thermocellum AD2 GN=AD2_2907 PE=4 SV=1 ; EVALUE=5e-54 ;
Q/S_length_ratio=1.533"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|C7HJH4|C7HJH4_CLOTM ;
ALN/Q_length_ratio=0.550 ; DESCRIPTION=Resolvase domain
protein OS=Ruminiclostridium thermocellum DSM 2360
GN=ClothDRAFT_2833 PE=4 SV=1 ; EVALUE=5e-54 ;
Q/S_length_ratio=1.533"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|E6UT30|E6UT30_CLOTL ;
ALN/Q_length_ratio=0.550 ; DESCRIPTION=Resolvase domain
protein OS=Clostridium thermocellum (strain DSM 1313 / LMG
6656 / LQ8) GN=Clo1313_1643 PE=4 SV=1 ; EVALUE=5e-54 ;
Q/S_length_ratio=1.533"
/note="Pfam_scan:hit_1 (18..181);
Pfam:PF00239.16:Resolvase;
Pfam_type:Domain;HMM_aln_Length:120; HMM_Length:141;
EVALUE:2.6e-17; BITSCORE: 63.0"
/note="Pfam_scan:hit_2 (218..312);
Pfam:PF07508.8:Recombinase;
Pfam_type:Family;HMM_aln_Length:98; HMM_Length:102;
EVALUE:5.8e-11; BITSCORE: 42.5"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0006259"
BEGIN
1 MFKNSSKSDW SLSSTPLAYS YIRFSTPEQR KGDSLRRQTK AVTEWCDRNN VRLDISTTLQ
61 DLGKSAFLGE HRKNHDRYAL AAFLKMVDDG KIPHGSFLVV ENLDRLTREH LRAAVTLFLS
121 IQERGVNIVT TSPEKVYRHD SQDMIDIILA VVELSRGHGE SARKSELGGK AWRAKRDAAR
181 RGEVQPSRRE GRVSGMNLLT HKLPLWVEEK GGKLVAIPER AAAVKRIFAL GAAGHGAVTI
241 IKQLKQENVK AFSKSGRWSK SYIIRILRDR RALGDYQAHD HGKPDGDPIS GYYPAVVTEA
301 EFYAALKPLT ARKAGLQPVT RLGKHVNLFA GLLRDAHGGS YNPNTQHTRV LVNYTALEGY
361 DRRRTFPLAV FERALLEHLV EIEPHEIIGG DKSEDEVVSL SRQLDGIESE LSLAVRWMDD
421 NGFSAAIAAR IRQLEEKKRS ASEQLDDAKR RVSTPVNGAW KEFRNLAEVM DKSKNPIDTR
481 VRLRAALRRA IDHIVMLVIP RGTGRDRFCM VTVIFAGGKD RRWYRIWYQS GSNGRPARQA
541 ANAFDFGESD DLDLTKPELI AHMEDHFSNM DNDQLQEFLE ESMVELK
//