LOCUS VTS01612.1 347 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dna topoisomerase : DNA topoisomerase
OS=Caulobacter segnis (strain ATCC 21756 / DSM 7131 /
JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) GN=Cseg_3110
PE=4 SV=1: Topoisom_I protein.
ACCESSION LR593886-7801
PROTEIN_ID VTS01612.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_77910"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D5VM27|D5VM27_CAUST ;
ALN/Q_length_ratio=0.908 ; DESCRIPTION=DNA topoisomerase
OS=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM
7823 / NBRC 15250 / LMG 17158 / TK0059) GN=Cseg_3110 PE=4
SV=1 ; EVALUE=1e-108 ; Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A0A0A0D7A6|A0A0A0D7A6_9PROT ;
ALN/Q_length_ratio=0.922 ; DESCRIPTION=DNA topoisomerase I
OS=Inquilinus limosus MP06 GN=P409_19080 PE=4 SV=1 ;
EVALUE=1e-107 ; Q/S_length_ratio=0.977"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L1QR38|L1QR38_BREDI ;
ALN/Q_length_ratio=0.916 ; DESCRIPTION=Uncharacterized
protein OS=Brevundimonas diminuta 470-4
GN=HMPREF0185_00681 PE=4 SV=1 ; EVALUE=1e-107 ;
Q/S_length_ratio=1.078"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|I8TDP3|I8TDP3_9GAMM ;
ALN/Q_length_ratio=0.865 ; DESCRIPTION=Putative DNA
topoisomerase OS=Hydrocarboniphaga effusa AP103
GN=WQQ_22270 PE=4 SV=1 ; EVALUE=1e-107 ;
Q/S_length_ratio=0.967"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|B0T804|B0T804_CAUSK ;
ALN/Q_length_ratio=0.865 ; DESCRIPTION=DNA topoisomerase,
type I, putative OS=Caulobacter sp. (strain K31)
GN=Caul_3640 PE=4 SV=1 ; EVALUE=1e-107 ;
Q/S_length_ratio=1.033"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|R0EHR0|R0EHR0_CAUCE ;
ALN/Q_length_ratio=0.908 ; DESCRIPTION=Topoisomerase IB
OS=Caulobacter crescentus OR37 GN=OR37_03445 PE=4 SV=1 ;
EVALUE=1e-106 ; Q/S_length_ratio=1.009"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|E1TJB1|E1TJB1_BURSG ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=DNA topoisomerase
OS=Burkholderia sp. (strain CCGE1003) GN=BC1003_3791 PE=4
SV=1 ; EVALUE=1e-106 ; Q/S_length_ratio=0.763"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A069PLC5|A0A069PLC5_9BURK ;
ALN/Q_length_ratio=0.911 ; DESCRIPTION=DNA topoisomerase
OS=Burkholderia glathei GN=BG61_20035 PE=4 SV=1 ;
EVALUE=1e-106 ; Q/S_length_ratio=0.789"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A085FS45|A0A085FS45_9BURK ;
ALN/Q_length_ratio=0.916 ; DESCRIPTION=Putative DNA
topoisomerase I OS=Massilia sp. LC238 GN=FG94_01154 PE=4
SV=1 ; EVALUE=1e-105 ; Q/S_length_ratio=0.876"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A069P1J2|A0A069P1J2_9BURK ;
ALN/Q_length_ratio=0.928 ; DESCRIPTION=DNA topoisomerase
OS=Burkholderia grimmiae GN=BG57_06080 PE=4 SV=1 ;
EVALUE=1e-105 ; Q/S_length_ratio=0.794"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|B3RCQ8|B3RCQ8_CUPTR ;
ALN/Q_length_ratio=0.937 ; DESCRIPTION=Putative
Eukaryotic-like DNA topoisomerase I OS=Cupriavidus
taiwanensis (strain R1 / LMG 19424) GN=RALTA_B2106 PE=4
SV=1 ; EVALUE=1e-105 ; Q/S_length_ratio=0.961"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|E8YR65|E8YR65_9BURK ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=DNA topoisomerase
OS=Burkholderia sp. CCGE1001 GN=BC1001_3744 PE=4 SV=1 ;
EVALUE=1e-105 ; Q/S_length_ratio=0.780"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|K0DS67|K0DS67_9BURK ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=DNA topoisomerase I
OS=Burkholderia phenoliruptrix BR3459a GN=BUPH_00310 PE=4
SV=1 ; EVALUE=1e-105 ; Q/S_length_ratio=0.780"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A086WEC2|A0A086WEC2_9BURK ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=DNA topoisomerase I
OS=Massilia consociata GN=JN27_04750 PE=4 SV=1 ;
EVALUE=1e-105 ; Q/S_length_ratio=0.876"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|B1FU05|B1FU05_9BURK ;
ALN/Q_length_ratio=0.928 ; DESCRIPTION=Putative DNA
topoisomerase, type I OS=Burkholderia graminis C4D1M
GN=BgramDRAFT_0401 PE=4 SV=1 ; EVALUE=1e-105 ;
Q/S_length_ratio=0.764"
/note="Pfam_scan:hit_1 (93..324);
Pfam:PF01028.15:Topoisom_I;
Pfam_type:Domain;HMM_aln_Length:211; HMM_Length:235;
EVALUE:6e-57; BITSCORE: 192.4"
/note="GO_domain:GO:0016887"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0051276"
/note="GO_domain:GO:0006259"
/note="GO_domain:GO:0016853"
/note="Enzyme_Code:EC:3.6.1"
/note="Enzyme_Code:EC:3.6.1.3"
/note="Enzyme_Code:EC:5.99.1"
/note="Enzyme_Code:EC:5.99.1.3"
/note="Enzyme_Code:EC:5.99.1.2"
/note="Enzyme_Code:EC:3.6.1.15"
BEGIN
1 MPNLTARKST QKKSTSPPFV FHAKARLRLW TDTKPALTRE RAGSGFRYRD TDGRVVRCIA
61 TLARIRALAI PPAWVNVLIC PDANGHLQAV GFDVRGRKQY RYHPAFRAKR DGTKYERVLA
121 FGRALSRIRT RVEYDLRRRG LSRDKVLAVV VKLLDRTHLR VGNAEYVRAN QSFGLSTLLD
181 RHVTFTRGAV RIKFRGKSGV RHDRIVSDAK LARLVRQCRD LPGQDLFQYR AGSGSRPIGS
241 ADVNAYIRRA AGAEFTAKDF RTWAGTVKAA MKLAALPKPE TKTEAERAVC SVVREVALEL
301 GNTPAVCRKS YVHPRVLEAF TGNGFPTTRA RGHLSADESR VIRLLGG
//