LOCUS VTS01503.1 403 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana catalytic phage domain protein : Integrase
family protein OS=Planctomyces limnophilus (strain ATCC
43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_1106 PE=4
SV=1: Phage_integrase protein.
ACCESSION LR593886-7764
PROTEIN_ID VTS01503.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_78280"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D5STV6|D5STV6_PLAL2 ;
ALN/Q_length_ratio=0.993 ; DESCRIPTION=Integrase family
protein OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_1106 PE=4 SV=1 ;
EVALUE=2e-77 ; Q/S_length_ratio=0.978"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|Q7UE35|Q7UE35_RHOBA ;
ALN/Q_length_ratio=0.948 ; DESCRIPTION=Putative
uncharacterized protein OS=Rhodopirellula baltica (strain
SH1) GN=RB11615 PE=4 SV=1 ; EVALUE=1e-75 ;
Q/S_length_ratio=1.020"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0DAZ7|L0DAZ7_SINAD ;
ALN/Q_length_ratio=0.809 ; DESCRIPTION=Site-specific
recombinase XerD OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1635
PE=4 SV=1 ; EVALUE=6e-75 ; Q/S_length_ratio=1.047"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5U251|M5U251_9PLAN ;
ALN/Q_length_ratio=1.005 ; DESCRIPTION=Integrase,
catalytic core, phage domain protein OS=Rhodopirellula
sallentina SM41 GN=RSSM_06627 PE=4 SV=1 ; EVALUE=7e-75 ;
Q/S_length_ratio=0.976"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|Q7UYR2|Q7UYR2_RHOBA ;
ALN/Q_length_ratio=1.022 ; DESCRIPTION=Putative
uncharacterized protein OS=Rhodopirellula baltica (strain
SH1) GN=RB437 PE=4 SV=1 ; EVALUE=5e-66 ;
Q/S_length_ratio=0.971"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M5SDD6|M5SDD6_9PLAN ;
ALN/Q_length_ratio=1.022 ; DESCRIPTION=Integrase,
catalytic core, phage domain protein OS=Rhodopirellula
europaea SH398 GN=RESH_05270 PE=4 SV=1 ; EVALUE=2e-65 ;
Q/S_length_ratio=0.978"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Q7UK88|Q7UK88_RHOBA ;
ALN/Q_length_ratio=1.022 ; DESCRIPTION=Putative
uncharacterized protein OS=Rhodopirellula baltica (strain
SH1) GN=RB10785 PE=4 SV=1 ; EVALUE=4e-65 ;
Q/S_length_ratio=0.939"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|L7CM44|L7CM44_RHOBT ;
ALN/Q_length_ratio=1.022 ; DESCRIPTION=Protein containing
Integrase, catalytic core, phage domain protein
OS=Rhodopirellula baltica SWK14 GN=RBSWK_00706 PE=4 SV=1 ;
EVALUE=1e-64 ; Q/S_length_ratio=0.978"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M5RS96|M5RS96_9PLAN ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Uncharacterized
protein OS=Rhodopirellula maiorica SM1 GN=RMSM_00903 PE=4
SV=1 ; EVALUE=2e-64 ; Q/S_length_ratio=1.036"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5SY05|M5SY05_9PLAN ;
ALN/Q_length_ratio=0.866 ; DESCRIPTION=Integrase,
catalytic core, phage domain protein OS=Rhodopirellula sp.
SWK7 GN=RRSWK_05777 PE=4 SV=1 ; EVALUE=2e-61 ;
Q/S_length_ratio=1.028"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|F2AU29|F2AU29_RHOBT ;
ALN/Q_length_ratio=1.022 ; DESCRIPTION=Protein containing
Integrase, catalytic core, phage domain OS=Rhodopirellula
baltica WH47 GN=RBWH47_04993 PE=4 SV=1 ; EVALUE=3e-61 ;
Q/S_length_ratio=0.978"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M2AUC5|M2AUC5_9PLAN ;
ALN/Q_length_ratio=0.814 ; DESCRIPTION=Protein containing
Integrase, catalytic core, phage domain protein
OS=Rhodopirellula europaea 6C GN=RE6C_02682 PE=4 SV=1 ;
EVALUE=2e-56 ; Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M5TAB7|M5TAB7_9PLAN ;
ALN/Q_length_ratio=1.077 ; DESCRIPTION=Uncharacterized
protein OS=Rhodopirellula sp. SWK7 GN=RRSWK_05083 PE=4
SV=1 ; EVALUE=4e-56 ; Q/S_length_ratio=0.929"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M5S0R5|M5S0R5_9PLAN ;
ALN/Q_length_ratio=0.814 ; DESCRIPTION=Integrase,
catalytic core, phage domain protein OS=Rhodopirellula
europaea SH398 GN=RESH_04339 PE=4 SV=1 ; EVALUE=1e-55 ;
Q/S_length_ratio=0.966"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M5SZQ4|M5SZQ4_9PLAN ;
ALN/Q_length_ratio=0.985 ; DESCRIPTION=Integrase,
catalytic core, phage domain protein OS=Rhodopirellula sp.
SWK7 GN=RRSWK_05094 PE=4 SV=1 ; EVALUE=5e-53 ;
Q/S_length_ratio=0.976"
/note="Pfam_scan:hit_1 (196..393);
Pfam:PF00589.17:Phage_integrase;
Pfam_type:Family;HMM_aln_Length:150; HMM_Length:173;
EVALUE:4e-15; BITSCORE: 55.9"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0006259"
BEGIN
1 MARKRNPAPA YIKHTKSGRG RLQWYDAAGI RHEKLLPGLF GSPESLAAKA RLELEIATSP
61 AAPLVTGIDP RYGASVAELL VAFLEHAERY YRDPDGKPGS EVVSLKRSIK PVRELYADLS
121 AVEFGPKALA VVRQSMVRAG LCRNLINKRI DRVKRVFKWA ASEELVPVTT YEALRTLAGL
181 RRGRTEAKES EPVLPIDDET VRATLPHLPH YIRVMVELLW HTGMRPSEVV AMTLDRIDRS
241 VAPWVYRPAH HKTAHRGKAR AIPLGPNARA VLTAFLVDRS LTPDAPLFSP KRARDERFEQ
301 LRLGRKTKVQ PSQVSRKKTN PKRKPSERYT AHAITQAVAI ATEKAGVPHW HPYQLRHAFG
361 TKVRKLFGLE HAGAALGHTK MSATEVYAQR DSALAVEVAA KLG
//