LOCUS VTS01467.1 224 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana transcriptional regulator : DNA-binding
heavy metal response regulator (Fragment) OS=mine drainage
metagenome GN=B2A_07583 PE=4 SV=1: Response_reg: Trans_reg_C
protein.
ACCESSION LR593886-7752
PROTEIN_ID VTS01467.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_78400"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|T0ZYK7|T0ZYK7_9ZZZZ ;
ALN/Q_length_ratio=0.987 ; DESCRIPTION=DNA-binding heavy
metal response regulator (Fragment) OS=mine drainage
metagenome GN=B2A_07583 PE=4 SV=1 ; EVALUE=1e-113 ;
Q/S_length_ratio=0.945"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A5GFH1|A5GFH1_GEOUR ;
ALN/Q_length_ratio=0.996 ; DESCRIPTION=Two component heavy
metal response transcriptional regulator, winged helix
family OS=Geobacter uraniireducens (strain Rf4)
GN=Gura_1986 PE=4 SV=1 ; EVALUE=1e-112 ;
Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|B9M457|B9M457_GEODF ;
ALN/Q_length_ratio=0.996 ; DESCRIPTION=Winged
helix-turn-helix heavy metal transcriptional response
regulator OS=Geobacter daltonii (strain DSM 22248 / JCM
15807 / FRC-32) GN=czcR PE=4 SV=1 ; EVALUE=1e-110 ;
Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|W4MG16|W4MG16_9DELT ;
ALN/Q_length_ratio=0.996 ; DESCRIPTION=Transcriptional
regulator OS=Candidatus Entotheonella sp. TSY2
GN=ETSY2_00530 PE=4 SV=1 ; EVALUE=1e-110 ;
Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0DNJ1|L0DNJ1_SINAD ;
ALN/Q_length_ratio=0.996 ; DESCRIPTION=Heavy metal
response regulator OS=Singulisphaera acidiphila (strain
ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_6762 PE=4 SV=1 ; EVALUE=1e-110 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|N0BHW2|N0BHW2_9RHIZ ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Two component
transcriptional regulator, winged helix family protein
OS=Hyphomicrobium denitrificans 1NES1 GN=HYPDE_40408 PE=4
SV=1 ; EVALUE=1e-110 ; Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|T1ARM8|T1ARM8_9ZZZZ ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=DNA-binding heavy
metal response regulator OS=mine drainage metagenome
GN=B1B_13426 PE=4 SV=1 ; EVALUE=1e-109 ;
Q/S_length_ratio=0.941"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|D6CSK9|D6CSK9_THIA3 ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=Transcriptional
activator protein czcR OS=Thiomonas arsenitoxydans (strain
DSM 22701 / CIP 110005 / 3As) GN=czcR PE=4 SV=1 ;
EVALUE=1e-109 ; Q/S_length_ratio=0.926"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|D5X0L9|D5X0L9_THIK1 ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=Two component
transcriptional regulator, winged helix family
OS=Thiomonas intermedia (strain K12) GN=Tint_1277 PE=4
SV=1 ; EVALUE=1e-109 ; Q/S_length_ratio=0.926"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A078BPK4|A0A078BPK4_9BURK ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=DNA-binding
response regulator in two-component regulatory system with
CusS OS=Thiomonas sp. CB2 GN=cusR PE=4 SV=1 ;
EVALUE=1e-108 ; Q/S_length_ratio=0.926"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|Q748Q5|Q748Q5_GEOSL ;
ALN/Q_length_ratio=0.996 ; DESCRIPTION=Winged-helix heavy
metal transcriptional response regulator OS=Geobacter
sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
GN=czcR PE=4 SV=1 ; EVALUE=1e-107 ;
Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|U3QUZ8|U3QUZ8_RALPI ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=Transcriptional
regulator OS=Ralstonia pickettii DTP0602 GN=N234_24050
PE=4 SV=1 ; EVALUE=1e-107 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|G3ITU0|G3ITU0_9GAMM ;
ALN/Q_length_ratio=0.996 ; DESCRIPTION=Two component heavy
metal response transcriptional regulator, winged helix
family OS=Methylobacter tundripaludum SV96 GN=Mettu_1426
PE=4 SV=1 ; EVALUE=1e-107 ; Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|D7ADV6|D7ADV6_GEOSK ;
ALN/Q_length_ratio=0.996 ; DESCRIPTION=Winged-helix heavy
metal transcriptional response regulator OS=Geobacter
sulfurreducens (strain DL-1 / KN400) GN=czcR PE=4 SV=1 ;
EVALUE=1e-107 ; Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|Q1LMJ6|Q1LMJ6_RALME ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=DNA-binding
response regulator in two-component regulatory system with
AgrS OS=Ralstonia metallidurans (strain CH34 / ATCC 43123
/ DSM 2839) GN=agrR PE=4 SV=1 ; EVALUE=1e-107 ;
Q/S_length_ratio=1.000"
/note="Pfam_scan:hit_1 (3..113);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:110; HMM_Length:112;
EVALUE:7.1e-28; BITSCORE: 96.8"
/note="Pfam_scan:hit_2 (143..220);
Pfam:PF00486.23:Trans_reg_C;
Pfam_type:Domain;HMM_aln_Length:73; HMM_Length:77;
EVALUE:9.5e-27; BITSCORE: 92.7"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0007165"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
BEGIN
1 MRMLVVEDEP KTAAFLKKGL EENGFVVDVA SRGNDGLHMV RTVDYDMVIL DVMLPGLDGW
61 AVITAVRQHD QQTPVLFLTA KDAVDDRVKG LELGADDYLV KPFAFSELLA RVRSLLRRSP
121 TRQAEVVRVA DLEVDVVRHR ASRAGIRLDL TPKEFALLSL LARRVGEVLS RTLIAEQVWD
181 VNFDSDTNVV DVHVRRLRAK VDDPFDKKLI HTVRGVGYVL EVRP
//