LOCUS VTS01341.1 1375 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana CRISPR-associated helicase Cas3, subtype
Dpsyc OS=Thioflavicoccus mobilis 8321 GN=Thimo_1278 PE=
4 SV=1 protein.
ACCESSION LR593886-7710
PROTEIN_ID VTS01341.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_78820"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|E8R1Y2|E8R1Y2_ISOPI ;
ALN/Q_length_ratio=0.756 ; DESCRIPTION=CRISPR-associated
helicase Cas3, Anaes-subtype OS=Isosphaera pallida (strain
ATCC 43644 / DSM 9630 / IS1B) GN=Isop_1832 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.300"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D0LSW7|D0LSW7_HALO1 ;
ALN/Q_length_ratio=0.752 ; DESCRIPTION=CRISPR-associated
helicase Cas3, Anaes-subtype OS=Haliangium ochraceum
(strain DSM 14365 / JCM 11303 / SMP-2) GN=Hoch_4850 PE=4
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.255"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|I4WMT2|I4WMT2_9GAMM ;
ALN/Q_length_ratio=0.703 ; DESCRIPTION=CRISPR-associated
helicase OS=Rhodanobacter denitrificans GN=UUC_12256 PE=4
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.385"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0GXH5|L0GXH5_9GAMM ;
ALN/Q_length_ratio=0.705 ; DESCRIPTION=CRISPR-associated
helicase Cas3, subtype Dpsyc OS=Thioflavicoccus mobilis
8321 GN=Thimo_1278 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.379"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|W0J201|W0J201_9BACT ;
ALN/Q_length_ratio=0.713 ; DESCRIPTION=CRISPR-associated
protein Cas3 OS=Opitutaceae bacterium TAV5 GN=OPIT5_21650
PE=4 SV=1 ; EVALUE=1e-168 ; Q/S_length_ratio=1.345"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|I6ANP1|I6ANP1_9BACT ;
ALN/Q_length_ratio=0.713 ; DESCRIPTION=CRISPR-associated
helicase Cas3, subtype Dpsyc OS=Opitutaceae bacterium TAV1
GN=OpiT1DRAFT_01054 PE=4 SV=1 ; EVALUE=1e-168 ;
Q/S_length_ratio=1.345"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A9GQD0|A9GQD0_SORC5 ;
ALN/Q_length_ratio=0.724 ; DESCRIPTION=Uncharacterized
protein OS=Sorangium cellulosum (strain So ce56)
GN=sce0266 PE=4 SV=1 ; EVALUE=1e-162 ;
Q/S_length_ratio=1.374"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|S4XNU3|S4XNU3_SORCE ;
ALN/Q_length_ratio=0.722 ; DESCRIPTION=Uncharacterized
protein OS=Sorangium cellulosum So0157-2 GN=SCE1572_02230
PE=4 SV=1 ; EVALUE=1e-161 ; Q/S_length_ratio=1.376"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|G2LLL4|G2LLL4_CHLTF ;
ALN/Q_length_ratio=0.734 ; DESCRIPTION=CRISPR-associated
helicase Cas3, Anaes-subtype OS=Chloracidobacterium
thermophilum (strain B) GN=Cabther_B0813 PE=4 SV=1 ;
EVALUE=1e-158 ; Q/S_length_ratio=1.338"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|D0MKL2|D0MKL2_RHOM4 ;
ALN/Q_length_ratio=0.665 ; DESCRIPTION=CRISPR-associated
helicase Cas3, Anaes-subtype OS=Rhodothermus marinus
(strain ATCC 43812 / DSM 4252 / R-10) GN=Rmar_2808 PE=4
SV=1 ; EVALUE=1e-134 ; Q/S_length_ratio=1.474"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F8IDR9|F8IDR9_ALIAT ;
ALN/Q_length_ratio=0.708 ; DESCRIPTION=Uncharacterized
protein OS=Alicyclobacillus acidocaldarius (strain Tc-4-1)
GN=TC41_3233 PE=4 SV=1 ; EVALUE=1e-133 ;
Q/S_length_ratio=1.357"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|D3NY99|D3NY99_AZOS1 ;
ALN/Q_length_ratio=0.717 ; DESCRIPTION=Uncharacterized
protein OS=Azospirillum sp. (strain B510) GN=AZL_027400
PE=4 SV=1 ; EVALUE=1e-133 ; Q/S_length_ratio=1.338"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|K5BCL8|K5BCL8_9MYCO ;
ALN/Q_length_ratio=0.709 ; DESCRIPTION=CRISPR-associated
endonuclease Cas3-HD OS=Mycobacterium hassiacum DSM 44199
GN=C731_0636 PE=4 SV=1 ; EVALUE=1e-130 ;
Q/S_length_ratio=1.361"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|E6Q6Q2|E6Q6Q2_9ZZZZ ;
ALN/Q_length_ratio=0.706 ; DESCRIPTION=Putative
CRISPR-associated helicase Cas3,Anaes-subtype OS=mine
drainage metagenome GN=CARN4_1242 PE=4 SV=1 ;
EVALUE=1e-128 ; Q/S_length_ratio=1.298"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|I0RXG5|I0RXG5_MYCXE ;
ALN/Q_length_ratio=0.695 ; DESCRIPTION=Uncharacterized
protein OS=Mycobacterium xenopi RIVM700367 GN=MXEN_06383
PE=4 SV=1 ; EVALUE=1e-127 ; Q/S_length_ratio=1.410"
BEGIN
1 MSSPTPDQFE AFYKAATLAI AELELAERRV REPGYEPEKP PKAKEPFPWQ ERLATRVCGG
61 NWPRAIALPT AAGKTACIDI AIFALACGAS DFRQPRRIFF VVDRRIVVDQ AWMHAKKLAK
121 ALRTAKSGIL KQVADALRAI AEPGWHELSE KEQDEVRPLD VYALRGGMYR ESAWARSPLQ
181 PTVIASTVDQ VGSRLLFRGY GVSDSMKPVH AGLVGNDSLI LLDEAHCAKP FDQTMRAVEQ
241 YRAWGEKNEA TLRFVSITAT PLGGLPESQI ERAAVEDRAH PVLGARINAS KPARLVVAEK
301 AKGKTWKQWG KPLVEKLVEQ AKELAGEFAC VGIIVNRVAT ARELAKRLGA EAVLLTGRMR
361 PLDRDRLFTE RLQPLLSGAS GEPPKFVVGT QCLECGADFD FHALVTECAS LDALRQRFGR
421 LNRVAARSSA KAVVVIRSDQ TEPEEKETDR DPVYDNALAN TWNWLNANAK DGVFDFGVSA
481 VNEVLSGVSD EKLSELNAPS KDAPVLFPAH LDCWVQTHPI PTPDPDPSLF LHGPKQAGQP
541 DVQVVFRADL GDNSDLWAEI VALCPPSSSE AVAVPIGVFK KWMTDELVTD DTADVEGGTP
601 EEKDEREEEP TPGERIALRW KGGDSDQTLV LTVPSDEFVR PGNLFVVPCS APGIEGLGDF
661 PFGSVTDYAE EAFQCSRDKA LLRLPDLVIP EDASKGEEIE SATAAIERLR ELPDGDLPDW
721 QKRAADHFAE PKNLRRCEIE RHPLGGFVIT GKRRLGQFAP TYLDDSEPAE SFRGVAVTLK
781 DHSAGVAWHA ERFAKVCGLD RMLFTQAGLW HDLGKLDPRF QAMLRQSSPR TAVGDPLAKS
841 ARSPRTEVER DEARQIHKYP KGARHELLSV ALVTEKVGAD KVNDLLLHLI ATHHGSARPF
901 TSPVDDSTDG IDTHRPFTPE LFGETFPSTS YRQDIRTWNA ELPERFWRVI RKYGWWGAAY
961 HETVFRLADH TQSAAEQEDE VTPAPGVTAW VSTPTDTARP GAYPLPLTGF DGSNPLSFLA
1021 ALGTLRLAEE LFPGTMLKWQ RVDLWRPTLM LPTATSPEEF VSRLHARVHC GIDPKAEEIS
1081 EKRHKDYRQR KKTTELARQL VKDRKLRGKE REEAIAKEVS PLEIEEFAAR REWLLALESA
1141 VPAPFLSLGK SIAVSQEEFA AFASRNAQRL HKIGSSERSN ADFTTAFGNE ACIDGNGRII
1201 PTEFQLITGS GHQFFLDTFG ALMQSVTPDR LQRALFGPWV YSDLRLSFRW DPIDDRRYAV
1261 SWEDPSSKEV RTEHGANLLA AFALPLFPVA PTRRGARTTG VNSDCEEATF TWPMWEDPRR
1321 VDSIRSLFQC HRLRTEKVKL STSESYGVAL LYRTRKFEVG SPPLSKLNLC TAVPV
//