LOCUS VTS01137.1 510 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana abc transporter substrate-binding protein
: Extracellular solute-binding protein family 1 OS=Arcobacter
nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604
/ NCTC 12251 / CI) GN=Arnit_1187 PE=4 SV=1: SBP_bac_1
protein.
ACCESSION LR593886-7642
PROTEIN_ID VTS01137.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_79500"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D5V418|D5V418_ARCNC ;
ALN/Q_length_ratio=0.924 ; DESCRIPTION=Extracellular
solute-binding protein family 1 OS=Arcobacter nitrofigilis
(strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 /
CI) GN=Arnit_1187 PE=4 SV=1 ; EVALUE=4e-20 ;
Q/S_length_ratio=1.041"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|I0IA22|I0IA22_CALAS ;
ALN/Q_length_ratio=0.941 ; DESCRIPTION=Putative ABC
transporter substrate binding protein OS=Caldilinea
aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /
STL-6-O1) GN=CLDAP_40700 PE=4 SV=1 ; EVALUE=1e-18 ;
Q/S_length_ratio=1.028"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A0A0A0E1T8|A0A0A0E1T8_9SPIO ;
ALN/Q_length_ratio=0.951 ; DESCRIPTION=ABC transporter
substrate-binding protein OS=Spirochaeta sp. JC202
GN=JY97_02410 PE=4 SV=1 ; EVALUE=4e-17 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|X6L1F1|X6L1F1_9RHOB ;
ALN/Q_length_ratio=0.675 ; DESCRIPTION=ABC transporter
substrate-binding protein OS=Rhodobacteraceae bacterium
PD-2 GN=P279_10615 PE=4 SV=1 ; EVALUE=3e-16 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|C7D9U6|C7D9U6_9RHOB ;
ALN/Q_length_ratio=0.675 ; DESCRIPTION=ABC transporter
solute-binding protein OS=Thalassobium sp. R2A62
GN=TR2A62_3575 PE=4 SV=1 ; EVALUE=2e-14 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|E4TZC2|E4TZC2_SULKY ;
ALN/Q_length_ratio=0.900 ; DESCRIPTION=Extracellular
solute-binding protein family 1 OS=Sulfuricurvum kujiense
(strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1)
GN=Sulku_1475 PE=4 SV=1 ; EVALUE=2e-13 ;
Q/S_length_ratio=1.016"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A3JMP7|A3JMP7_9RHOB ;
ALN/Q_length_ratio=0.894 ; DESCRIPTION=Putative ABC
transporter solute-binding protein OS=Rhodobacteraceae
bacterium HTCC2150 GN=RB2150_12936 PE=4 SV=1 ;
EVALUE=3e-13 ; Q/S_length_ratio=0.998"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|B6AU21|B6AU21_9RHOB ;
ALN/Q_length_ratio=0.859 ; DESCRIPTION=ABC transporter
solute-binding protein OS=Rhodobacteraceae bacterium
HTCC2083 GN=RB2083_1280 PE=4 SV=1 ; EVALUE=4e-12 ;
Q/S_length_ratio=1.010"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|U4UUY5|U4UUY5_9RHOB ;
ALN/Q_length_ratio=0.859 ; DESCRIPTION=Carbohydrate ABC
transporter substrate-binding protein, CUT1 family
OS=Rhodobacteraceae bacterium HIMB11 GN=HIMB11_03199 PE=4
SV=1 ; EVALUE=2e-11 ; Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A084YAE2|A0A084YAE2_9CYAN ;
ALN/Q_length_ratio=0.998 ; DESCRIPTION=ABC transporter
substrate-binding protein OS=Calothrix sp. 336/3
GN=IJ00_04105 PE=4 SV=1 ; EVALUE=4e-11 ;
Q/S_length_ratio=0.985"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|W9DXD0|W9DXD0_PELUQ ;
ALN/Q_length_ratio=0.910 ; DESCRIPTION=Carbohydrate ABC
transporter substrate-binding protein, CUT1 family
OS=Candidatus Pelagibacter ubique HIMB083
GN=Pelub83DRAFT_0980 PE=4 SV=1 ; EVALUE=5e-11 ;
Q/S_length_ratio=1.002"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A0A0D9U7|A0A0A0D9U7_9PROT ;
ALN/Q_length_ratio=0.794 ; DESCRIPTION=ABC transporter
substrate-binding protein OS=Inquilinus limosus MP06
GN=P409_07755 PE=4 SV=1 ; EVALUE=9e-11 ;
Q/S_length_ratio=1.049"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|H0TG74|H0TG74_9BRAD ;
ALN/Q_length_ratio=0.843 ; DESCRIPTION=Putative ABC-type
sugar transport system, periplasmic component
OS=Bradyrhizobium sp. STM 3843 GN=BRAS3843_1380082 PE=4
SV=1 ; EVALUE=1e-10 ; Q/S_length_ratio=1.049"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|K9UWV1|K9UWV1_9CYAN ;
ALN/Q_length_ratio=0.998 ; DESCRIPTION=Carbohydrate ABC
transporter substrate-binding protein, CUT1 family
OS=Calothrix sp. PCC 6303 GN=Cal6303_0547 PE=4 SV=1 ;
EVALUE=1e-10 ; Q/S_length_ratio=0.985"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|U1H9D3|U1H9D3_9BRAD ;
ALN/Q_length_ratio=0.796 ; DESCRIPTION=Multiple sugar
transport system substrate-binding protein
OS=Bradyrhizobium sp. DFCI-1 GN=C207_00433 PE=4 SV=1 ;
EVALUE=1e-10 ; Q/S_length_ratio=1.049"
/note="Pfam_scan:hit_1 (75..343);
Pfam:PF01547.20:SBP_bac_1;
Pfam_type:Family;HMM_aln_Length:194; HMM_Length:315;
EVALUE:4.1e-09; BITSCORE: 36.6"
/note="GO_domain:GO:0006810"
/note="GO_domain:GO:0003674"
BEGIN
1 MQQPVHPIPR NRHKFHAVAT IASILGLTAG IISIGGCGDA PPTTNEKPKN HNGVKLTFSC
61 PDAPFAGAIE PMVRSWEART GAKVTLTRDA MTPTDSADLA VISAGQLGEW AEPGHLAALP
121 PKFRGGDHPL QWFGFLTDSA DRLAEWGAKT QAIPLTGDGY LVVYRVDRFG DQATGLDFVN
181 QFRRPLAPPA TWQEFAVIAE FFAKRDKKPS LPPLPADPAR AFDFFSRVAS SMDRPAFSEK
241 DLDGPKDTER LAFQFAMQTG APRLTAPGFE DAAKWFADLH AAGCLPPAGG SDDPVAALAE
301 NRAVLALVSL DQLARLPREN GAVPARFGLA SVPGSSRYFD AARGARIDVP APGTNYVPHF
361 SGGRLGVVRA RCASPEIAFD LLAELGGPAR SAELISTPGL GAGPTRSAHL APDHILLWLG
421 YGFDAERSKT FQDALRHYVG QTVKNPTYGL RGPDHAALTE VGGNAVRKLG TGAKPGDVLT
481 EAMNAWNAID AKAPNKAALV QWRKRAAGLN
//