LOCUS VTS00948.1 309 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rna-directed dna polymerase : RNA-directed
DNA polymerase OS=Niastella koreensis (strain DSM 17620
/ KACC 11465 / GR20-10) GN=Niako_6063 PE=4 SV=1: RVT_1
protein.
ACCESSION LR593886-7579
PROTEIN_ID VTS00948.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_80130"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|G8T7N3|G8T7N3_NIAKG ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=RNA-directed DNA
polymerase OS=Niastella koreensis (strain DSM 17620 / KACC
11465 / GR20-10) GN=Niako_6063 PE=4 SV=1 ; EVALUE=9e-35 ;
Q/S_length_ratio=0.616"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|X0QB97|X0QB97_9GAMM ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=Retron-type
RNA-directed DNA polymerase OS=Psychrobacter sp. JCM 18900
GN=JCM18900_12604 PE=4 SV=1 ; EVALUE=1e-31 ;
Q/S_length_ratio=0.912"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|U3A739|U3A739_9VIBR ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=Putative
RNA-directed DNA polymerase OS=Vibrio azureus NBRC 104587
GN=VAZ01S_031_00140 PE=4 SV=1 ; EVALUE=5e-31 ;
Q/S_length_ratio=0.712"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|K1KY04|K1KY04_9BACT ;
ALN/Q_length_ratio=0.777 ; DESCRIPTION=Retron-type reverse
transcriptase OS=Cecembia lonarensis LW9 GN=B879_04030
PE=4 SV=1 ; EVALUE=3e-30 ; Q/S_length_ratio=0.904"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A084STE4|A0A084STE4_9DELT ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=DNA polymerase
OS=Cystobacter violaceus Cb vi76 GN=Q664_20045 PE=4 SV=1 ;
EVALUE=4e-30 ; Q/S_length_ratio=0.652"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A017T1K8|A0A017T1K8_9DELT ;
ALN/Q_length_ratio=0.906 ; DESCRIPTION=Retron-type
RNA-directed DNA polymerase OS=Chondromyces apiculatus DSM
436 GN=CAP_7063 PE=4 SV=1 ; EVALUE=5e-30 ;
Q/S_length_ratio=0.645"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|B1M3T5|B1M3T5_METRJ ;
ALN/Q_length_ratio=0.838 ; DESCRIPTION=RNA-directed DNA
polymerase OS=Methylobacterium radiotolerans (strain ATCC
27329 / DSM 1819 / JCM 2831) GN=Mrad2831_1389 PE=4 SV=1 ;
EVALUE=6e-30 ; Q/S_length_ratio=0.489"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A090Q1D7|A0A090Q1D7_9FLAO ;
ALN/Q_length_ratio=0.748 ; DESCRIPTION=Retron-type
RNA-directed DNA polymerase OS=Nonlabens sediminis
GN=JCM19294_2290 PE=4 SV=1 ; EVALUE=1e-29 ;
Q/S_length_ratio=0.893"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|Q477P7|Q477P7_CUPPJ ;
ALN/Q_length_ratio=0.689 ; DESCRIPTION=RNA-directed DNA
polymerase OS=Cupriavidus pinatubonensis (strain JMP 134 /
LMG 1197) GN=Reut_A0004 PE=4 SV=1 ; EVALUE=1e-29 ;
Q/S_length_ratio=0.954"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A085WGI6|A0A085WGI6_9DELT ;
ALN/Q_length_ratio=0.845 ; DESCRIPTION=Retron-type
RNA-directed DNA polymerase OS=Hyalangium minutum
GN=DB31_9013 PE=4 SV=1 ; EVALUE=2e-29 ;
Q/S_length_ratio=0.656"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|U4T817|U4T817_9GAMM ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Retron-type
RNA-directed DNA polymerase OS=Psychrobacter aquaticus CMS
56 GN=M917_2761 PE=4 SV=1 ; EVALUE=2e-29 ;
Q/S_length_ratio=0.637"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A085X9H2|A0A085X9H2_9DELT ;
ALN/Q_length_ratio=0.845 ; DESCRIPTION=Retron-type
RNA-directed DNA polymerase OS=Enhygromyxa salina
GN=DB30_4870 PE=4 SV=1 ; EVALUE=2e-29 ;
Q/S_length_ratio=0.656"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A6GKS9|A6GKS9_9DELT ;
ALN/Q_length_ratio=0.939 ; DESCRIPTION=RNA-directed DNA
polymerase domain protein OS=Plesiocystis pacifica SIR-1
GN=PPSIR1_22406 PE=4 SV=1 ; EVALUE=2e-29 ;
Q/S_length_ratio=0.707"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|F8CE57|F8CE57_MYXFH ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=RNA-directed DNA
polymerase domain-containing protein OS=Myxococcus fulvus
(strain ATCC BAA-855 / HW-1) GN=LILAB_08025 PE=4 SV=1 ;
EVALUE=7e-29 ; Q/S_length_ratio=0.637"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|U2U1E9|U2U1E9_9DELT ;
ALN/Q_length_ratio=0.948 ; DESCRIPTION=Retron-type
RNA-directed DNA polymerase protein OS=Myxococcus sp.
(contaminant ex DSM 436) GN=A176_07381 PE=4 SV=1 ;
EVALUE=1e-28 ; Q/S_length_ratio=0.638"
/note="Pfam_scan:hit_1 (66..260); Pfam:PF00078.22:RVT_1;
Pfam_type:Family;HMM_aln_Length:209; HMM_Length:214;
EVALUE:1.1e-13; BITSCORE: 50.9"
/note="GO_domain:GO:0016779"
/note="GO_domain:GO:0003723"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0006259"
/note="Enzyme_Code:EC:2.7.7.49"
BEGIN
1 MWPIFTSLRR TLTGGRSGRT GDRPPVSSEA DWAERFARLG LPPETLRNII AADSLHPYFR
61 YRRFHKPKRD GGRREIAEPS PRLKRLQREI ITQYFATEQP HPAAVAYQRG KSTADHVWAH
121 AGAEIVITAD IRDFFPSTRA DRVEMWWRER VDSETARLLT LLTTDCGELP QGAPTSPGLS
181 NFLNTEMDAK LTRRATGACA RYTRYCDDLA FSWPTGFGPP SDFERGVRAT LHEFGYELHP
241 KKGWHVHRRG DEPEVTGAVL TRSGGVRLPA RIRQMMRALA RRATSADTER LKGYRGYAAM
301 IATRPRRRG
//