LOCUS       VTS00945.1               189 aa    PRT              BCT 03-FEB-2020
DEFINITION  Gemmata massiliana sigma-70 family rna polymerase sigma
            factor : RNA polymerase, sigma-24 subunit, ECF subfamily
            OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 /
            IS1B) GN=Isop_2781 PE=4 SV=1: Sigma70_ECF protein.
ACCESSION   LR593886-7578
PROTEIN_ID  VTS00945.1
SOURCE      Gemmata massiliana
  ORGANISM  Gemmata massiliana
            Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
            Gemmata.
REFERENCE   1
  AUTHORS   
  CONSRTM   Science for Life Laboratories
  JOURNAL   Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
            MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
            Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES             Qualifiers
     source          /organism="Gemmata massiliana"
                     /chromosome="1"
                     /isolate="Soil9"
                     /mol_type="genomic DNA"
                     /isolation_source="soil"
                     /db_xref="taxon:1210884"
     protein         /locus_tag="SOIL9_80140"
                     /note="BLAST_uniprot:hit_1 ;
                     ACCESSION=tr|E8R0Z6|E8R0Z6_ISOPI ;
                     ALN/Q_length_ratio=0.931 ; DESCRIPTION=RNA polymerase,
                     sigma-24 subunit, ECF subfamily OS=Isosphaera pallida
                     (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_2781 PE=4
                     SV=1 ; EVALUE=7e-20 ; Q/S_length_ratio=0.661"
                     /note="BLAST_uniprot:hit_2 ;
                     ACCESSION=tr|A0A090KMS8|A0A090KMS8_9BACT ;
                     ALN/Q_length_ratio=1.026 ; DESCRIPTION=Uncultured
                     bacterium genome assembly Metasoil_fosmids_resub
                     OS=uncultured bacterium PE=4 SV=1 ; EVALUE=1e-19 ;
                     Q/S_length_ratio=0.936"
                     /note="BLAST_uniprot:hit_3 ;
                     ACCESSION=tr|L0D8T7|L0D8T7_SINAD ;
                     ALN/Q_length_ratio=0.974 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_0873 PE=4 SV=1 ; EVALUE=4e-18 ;
                     Q/S_length_ratio=0.931"
                     /note="BLAST_uniprot:hit_4 ;
                     ACCESSION=tr|L0DQC7|L0DQC7_SINAD ;
                     ALN/Q_length_ratio=1.021 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_7020 PE=4 SV=1 ; EVALUE=8e-17 ;
                     Q/S_length_ratio=0.955"
                     /note="BLAST_uniprot:hit_5 ;
                     ACCESSION=tr|L0DCU8|L0DCU8_SINAD ;
                     ALN/Q_length_ratio=0.942 ; DESCRIPTION=DNA-directed RNA
                     polymerase specialized sigma subunit, sigma24
                     OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
                     18658 / VKM B-2454 / MOB10) GN=Sinac_2383 PE=4 SV=1 ;
                     EVALUE=1e-14 ; Q/S_length_ratio=0.959"
                     /note="BLAST_uniprot:hit_6 ;
                     ACCESSION=tr|M5UAE9|M5UAE9_9PLAN ;
                     ALN/Q_length_ratio=0.958 ; DESCRIPTION=Transcription
                     regulator LuxR OS=Rhodopirellula sallentina SM41
                     GN=RSSM_00164 PE=4 SV=1 ; EVALUE=3e-08 ;
                     Q/S_length_ratio=0.922"
                     /note="BLAST_uniprot:hit_7 ;
                     ACCESSION=tr|E8QXJ8|E8QXJ8_ISOPI ;
                     ALN/Q_length_ratio=0.899 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Isosphaera pallida
                     (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_2474 PE=4
                     SV=1 ; EVALUE=8e-08 ; Q/S_length_ratio=0.922"
                     /note="BLAST_uniprot:hit_8 ;
                     ACCESSION=tr|L0DL45|L0DL45_SINAD ;
                     ALN/Q_length_ratio=0.926 ; DESCRIPTION=DNA-directed RNA
                     polymerase specialized sigma subunit, sigma24
                     OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
                     18658 / VKM B-2454 / MOB10) GN=Sinac_5214 PE=4 SV=1 ;
                     EVALUE=2e-07 ; Q/S_length_ratio=0.969"
                     /note="BLAST_uniprot:hit_9 ;
                     ACCESSION=tr|M5T710|M5T710_9PLAN ;
                     ALN/Q_length_ratio=0.942 ; DESCRIPTION=RNA polymerase
                     sigma-70 OS=Rhodopirellula sp. SWK7 GN=RRSWK_02458 PE=4
                     SV=1 ; EVALUE=5e-07 ; Q/S_length_ratio=0.913"
                     /note="BLAST_uniprot:hit_10 ;
                     ACCESSION=tr|A3ZN77|A3ZN77_9PLAN ;
                     ALN/Q_length_ratio=0.640 ; DESCRIPTION=Uncharacterized
                     protein OS=Blastopirellula marina DSM 3645
                     GN=DSM3645_16495 PE=4 SV=1 ; EVALUE=1e-06 ;
                     Q/S_length_ratio=0.964"
                     /note="Pfam_scan:hit_1 (4..181);
                     Pfam:PF07638.6:Sigma70_ECF;
                     Pfam_type:Family;HMM_aln_Length:166; HMM_Length:185;
                     EVALUE:7.6e-13; BITSCORE: 48.5"
                     /note="GO_domain:GO:0003677"
                     /note="GO_domain:GO:0001071"
                     /note="GO_domain:GO:0000988"
                     /note="GO_domain:GO:0034641"
                     /note="GO_domain:GO:0009058"
                     /note="GO_domain:GO:0043234"
                     /note="GO_domain:GO:0005622"
BEGIN
        1 MSGNDDLLSL LEACRRRDPA ATAELVRRYL PHVRAAVRRR LATGMRMRFD SQDFAQDVWL
       61 SFFRAAIDRE DLRDEGGLVA YLSQMARLKV AEEYRHQTTQ KVGLNRDVPV SQVSDPTGRD
      121 PTPSQMVVAD DEWERLTAGL SDRERQMLQM LRDGHTHADT AAMFQLSEKT VQRLVRRLLS
      181 RGTSPGTPP
//