LOCUS VTS00933.1 748 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana pas pac sensor hybrid histidine kinase
: PAS/PAC sensor hybrid histidine kinase OS=Caldithrix
abyssi DSM 13497 GN=Calab_2608 PE=4 SV=1: PAS: PAS: PAS_3:
HisKA: HATPase_c: Response_reg protein.
ACCESSION LR593886-7574
PROTEIN_ID VTS00933.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_80180"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|H1XPA3|H1XPA3_9BACT ;
ALN/Q_length_ratio=0.682 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Caldithrix abyssi DSM 13497
GN=Calab_2608 PE=4 SV=1 ; EVALUE=1e-106 ;
Q/S_length_ratio=1.171"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A9A0Q4|A9A0Q4_DESOH ;
ALN/Q_length_ratio=0.837 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Desulfococcus oleovorans
(strain DSM 6200 / Hxd3) GN=Dole_3268 PE=4 SV=1 ;
EVALUE=1e-104 ; Q/S_length_ratio=0.693"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|I4C7Z0|I4C7Z0_DESTA ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=PAS domain S-box
OS=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 /
DCB-1) GN=Desti_3017 PE=4 SV=1 ; EVALUE=1e-104 ;
Q/S_length_ratio=0.492"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Q1IM85|Q1IM85_KORVE ;
ALN/Q_length_ratio=0.680 ; DESCRIPTION=Multi-sensor hybrid
histidine kinase OS=Koribacter versatilis (strain
Ellin345) GN=Acid345_3014 PE=4 SV=1 ; EVALUE=1e-103 ;
Q/S_length_ratio=0.661"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|H1XSG8|H1XSG8_9BACT ;
ALN/Q_length_ratio=0.826 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Caldithrix abyssi DSM 13497
GN=Calab_1764 PE=4 SV=1 ; EVALUE=1e-103 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|Q3A850|Q3A850_PELCD ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Sensor histidine
kinase response regulator, PAS and PAS domain-containing,
putative heme-binding site OS=Pelobacter carbinolicus
(strain DSM 2380 / Gra Bd 1) GN=Pcar_0181 PE=4 SV=1 ;
EVALUE=1e-102 ; Q/S_length_ratio=0.999"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|C6E6W3|C6E6W3_GEOSM ;
ALN/Q_length_ratio=1.015 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Geobacter sp. (strain M21)
GN=GM21_3722 PE=4 SV=1 ; EVALUE=1e-101 ;
Q/S_length_ratio=0.885"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A5G434|A5G434_GEOUR ;
ALN/Q_length_ratio=0.849 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Geobacter uraniireducens
(strain Rf4) GN=Gura_2373 PE=4 SV=1 ; EVALUE=1e-100 ;
Q/S_length_ratio=0.973"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|T0LE56|T0LE56_9BACT ;
ALN/Q_length_ratio=0.841 ; DESCRIPTION=Uncharacterized
protein OS=candidate division ZIXI bacterium RBG-1
GN=RBG1_1C00001G0253 PE=4 SV=1 ; EVALUE=1e-100 ;
Q/S_length_ratio=0.782"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A9A0Q8|A9A0Q8_DESOH ;
ALN/Q_length_ratio=0.917 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Desulfococcus oleovorans
(strain DSM 6200 / Hxd3) GN=Dole_3272 PE=4 SV=1 ;
EVALUE=1e-99 ; Q/S_length_ratio=0.778"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|Q212L2|Q212L2_RHOPB ;
ALN/Q_length_ratio=0.981 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Rhodopseudomonas palustris
(strain BisB18) GN=RPC_3132 PE=4 SV=1 ; EVALUE=4e-99 ;
Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|B3QUW3|B3QUW3_CHLT3 ;
ALN/Q_length_ratio=1.008 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Chloroherpeton thalassium
(strain ATCC 35110 / GB-78) GN=Ctha_2012 PE=4 SV=1 ;
EVALUE=3e-98 ; Q/S_length_ratio=0.937"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|B8FN21|B8FN21_DESAA ;
ALN/Q_length_ratio=0.852 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Desulfatibacillum alkenivorans
(strain AK-01) GN=Dalk_4209 PE=4 SV=1 ; EVALUE=4e-98 ;
Q/S_length_ratio=0.674"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|B5ECZ2|B5ECZ2_GEOBB ;
ALN/Q_length_ratio=1.015 ; DESCRIPTION=Sensor histidine
kinase response regulator, PAS, PAS and PAS
domain-containing OS=Geobacter bemidjiensis (strain Bem /
ATCC BAA-1014 / DSM 16622) GN=Gbem_3617 PE=4 SV=1 ;
EVALUE=6e-97 ; Q/S_length_ratio=0.885"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|B8FKK2|B8FKK2_DESAA ;
ALN/Q_length_ratio=0.874 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Desulfatibacillum alkenivorans
(strain AK-01) GN=Dalk_0107 PE=4 SV=1 ; EVALUE=2e-96 ;
Q/S_length_ratio=0.652"
/note="Pfam_scan:hit_1 (12..114); Pfam:PF00989.19:PAS;
Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:113;
EVALUE:4.6e-10; BITSCORE: 39.2"
/note="Pfam_scan:hit_2 (129..241); Pfam:PF00989.19:PAS;
Pfam_type:Domain;HMM_aln_Length:110; HMM_Length:113;
EVALUE:2.2e-12; BITSCORE: 46.7"
/note="Pfam_scan:hit_3 (278..364); Pfam:PF08447.6:PAS_3;
Pfam_type:Domain;HMM_aln_Length:76; HMM_Length:91;
EVALUE:2.1e-10; BITSCORE: 40.5"
/note="Pfam_scan:hit_4 (384..449); Pfam:PF00512.20:HisKA;
Pfam_type:Domain;HMM_aln_Length:59; HMM_Length:68;
EVALUE:4.1e-08; BITSCORE: 33.0"
/note="Pfam_scan:hit_5 (491..613);
Pfam:PF02518.21:HATPase_c;
Pfam_type:Domain;HMM_aln_Length:107; HMM_Length:111;
EVALUE:2e-20; BITSCORE: 72.5"
/note="Pfam_scan:hit_6 (630..741);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:110; HMM_Length:112;
EVALUE:1.2e-13; BITSCORE: 50.9"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0016301"
/note="GO_domain:GO:0004871"
/note="Enzyme_Code:EC:2.7.3"
/note="Enzyme_Code:EC:2.7.13.3"
BEGIN
1 MTPTMTPNTV PDEFRRLLDS TSDPIVIADE AGGIAFVNTR AERQFGYARA ELLGQSAEVL
61 VPEWFQIEDR ADFGPKGPRP LFGRRKDGTE FPARVTRGPV RLDGRFVFAV VTDTSARTSP
121 EPASHGGEEL FRGIFEHAGV PTALTDTENR FVRVNAAFAR MFGYFQADMV GMSAAELIHP
181 DDLHEALTTG KILLAGGRQQ VQTETRYRHR SGHIVWGLTS VSLVRGPSGR APVYLNQIQD
241 VTAQKLVEGE ARLSAARSRA FFSAAAVGMV EVAADARVLW ANDAFCQMIG YSLAELNEMP
301 GTEVLFPEDR AGVLAQYGEV AAGRVRSYEA DRRYRRKDGS VLRARVSVVA QTGTEGPARV
361 AIVVTETERK DGDAPVPPAQ KAESVEQRIG GLAHDLNNLL TVINGYAEML ADRIQNTDPT
421 YQLAQGAASA CQRAANLTRQ LLASSRRAAV APKLLDLNET VLQSTQLLRH LLGPGVEVST
481 NLAGSPSSVK ADPAQVEQLI LNLAINAKDA MPRGGQLAIE TRCVQLRDED RGTHADLAPG
541 EYVQLTVSDT GAGMTDEVKA RAFEPFFTTK EVGKGTGLGL SVVHGVVKQC GGWVSVESEL
601 GVGTAFKILL PAVAPVTGSV RLVSRPTGAV LLVENESETR ELARLVLEGQ GYRVLEAVSG
661 ADALRIAQEH TGPIELLVTD VALPEMSGRA VADILRGRHP AIKVLYVAGT ADDLAARRSA
721 IGADALLQKP FTPLSLAHKV RTVLGSSA
//