LOCUS VTS00680.1 385 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana membrane protein : MscS Mechanosensitive
ion channel OS=Chondromyces apiculatus DSM 436 GN=CAP_3804
PE=4 SV=1: MS_channel protein.
ACCESSION LR593886-7489
PROTEIN_ID VTS00680.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_81030"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A017T6W2|A0A017T6W2_9DELT ;
ALN/Q_length_ratio=0.943 ; DESCRIPTION=MscS
Mechanosensitive ion channel OS=Chondromyces apiculatus
DSM 436 GN=CAP_3804 PE=4 SV=1 ; EVALUE=6e-88 ;
Q/S_length_ratio=0.932"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A4CHM7|A4CHM7_ROBBH ;
ALN/Q_length_ratio=0.865 ; DESCRIPTION=Membrane protein
OS=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501
/ KCTC 12146) GN=RB2501_06035 PE=4 SV=1 ; EVALUE=1e-80 ;
Q/S_length_ratio=1.075"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|G0LBB0|G0LBB0_ZOBGA ;
ALN/Q_length_ratio=0.787 ; DESCRIPTION=Small-conductance
mechanosensitive channel OS=Zobellia galactanivorans
(strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij)
GN=zobellia_1870 PE=4 SV=1 ; EVALUE=2e-80 ;
Q/S_length_ratio=1.075"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|E4TVR2|E4TVR2_MARTH ;
ALN/Q_length_ratio=0.870 ; DESCRIPTION=MscS
Mechanosensitive ion channel OS=Marivirga tractuosa
(strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 /
VKM B-1430 / H-43) GN=Ftrac_1180 PE=4 SV=1 ; EVALUE=8e-79
; Q/S_length_ratio=1.075"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A3XME8|A3XME8_LEEBM ;
ALN/Q_length_ratio=0.808 ; DESCRIPTION=Membrane protein
OS=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG
51940 / MED217) GN=MED217_07696 PE=4 SV=1 ; EVALUE=8e-79 ;
Q/S_length_ratio=1.046"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L7UAJ9|L7UAJ9_MYXSD ;
ALN/Q_length_ratio=0.927 ; DESCRIPTION=Mechanosensitive
ion channel family protein OS=Myxococcus stipitatus
(strain DSM 14675 / JCM 12634 / Mx s8) GN=MYSTI_03325 PE=4
SV=1 ; EVALUE=1e-77 ; Q/S_length_ratio=0.948"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A0A1DAN2|A0A0A1DAN2_9FLAO ;
ALN/Q_length_ratio=0.761 ; DESCRIPTION=Membrane protein
OS=Cellulophaga baltica NN016038 GN=M667_05965 PE=4 SV=1 ;
EVALUE=3e-77 ; Q/S_length_ratio=1.081"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A099NJT1|A0A099NJT1_9FLAO ;
ALN/Q_length_ratio=0.761 ; DESCRIPTION=Membrane protein
OS=Cellulophaga sp. E6(2014) GN=EL45_02795 PE=4 SV=1 ;
EVALUE=4e-77 ; Q/S_length_ratio=1.081"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A085XGN4|A0A085XGN4_9DELT ;
ALN/Q_length_ratio=0.990 ; DESCRIPTION=Membrane protein
OS=Enhygromyxa salina GN=DB30_2299 PE=4 SV=1 ;
EVALUE=1e-76 ; Q/S_length_ratio=0.731"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A085W722|A0A085W722_9DELT ;
ALN/Q_length_ratio=0.953 ; DESCRIPTION=Membrane protein
OS=Hyalangium minutum GN=DB31_2603 PE=4 SV=1 ;
EVALUE=2e-76 ; Q/S_length_ratio=0.716"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|I3C830|I3C830_9FLAO ;
ALN/Q_length_ratio=0.764 ; DESCRIPTION=Small-conductance
mechanosensitive channel OS=Joostella marina DSM 19592
GN=JoomaDRAFT_2812 PE=4 SV=1 ; EVALUE=3e-76 ;
Q/S_length_ratio=1.242"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A9GK09|A9GK09_SORC5 ;
ALN/Q_length_ratio=0.930 ; DESCRIPTION=Putative
mechanosensitive channel protein OS=Sorangium cellulosum
(strain So ce56) GN=sce6347 PE=4 SV=1 ; EVALUE=6e-76 ;
Q/S_length_ratio=0.603"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|E6XBW2|E6XBW2_CELAD ;
ALN/Q_length_ratio=0.662 ; DESCRIPTION=MscS
Mechanosensitive ion channel OS=Cellulophaga algicola
(strain DSM 14237 / IC166 / ACAM 630) GN=Celal_1655 PE=4
SV=1 ; EVALUE=6e-76 ; Q/S_length_ratio=1.081"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|U2SI20|U2SI20_9DELT ;
ALN/Q_length_ratio=0.881 ; DESCRIPTION=Membrane protein
OS=Myxococcus sp. (contaminant ex DSM 436) GN=A176_01035
PE=4 SV=1 ; EVALUE=1e-75 ; Q/S_length_ratio=0.699"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A085WAS3|A0A085WAS3_9DELT ;
ALN/Q_length_ratio=0.886 ; DESCRIPTION=Membrane protein
OS=Hyalangium minutum GN=DB31_1804 PE=4 SV=1 ;
EVALUE=3e-74 ; Q/S_length_ratio=0.934"
/note="Pfam_scan:hit_1 (157..359);
Pfam:PF00924.13:MS_channel;
Pfam_type:Family;HMM_aln_Length:190; HMM_Length:206;
EVALUE:4.6e-27; BITSCORE: 94.6"
/note="GO_domain:GO:0055085"
/note="GO_domain:GO:0005575"
BEGIN
1 MLDRFAAWLS DPSNVWLGGP AFLGVTTGQW VALALFAATG WVLGRLSGYP ARSALQRVQR
61 RVPSVVWAEG LEDRLTAPIA LLVTVAVLRA GCELLELSHG AGSGVRLACN IVLISVATLL
121 VVRLVGVAKE YLQAVLVGRT TDPGRIRSIA TRVTVPARIL QFLLWIAGIA LALLQFQAVR
181 EVGVSLLASA GVAGVVLGLA AQRTVGNVLA GLQLAFAEPV RIGDTVVVEG EFGVVEEINL
241 TNVVVKVWDL HRLVLPVSYF VEKPFQNWSR GSTEMMGAVM LQADFSVPVP ELRAELGRVL
301 AATDLWDGKT SNLQVTELSG GRVELRALVS ASDSGRLWDL RCHVREQLLT WLQSRGQRHL
361 PVQRIESIGG NGNGHYPPGT NGPKT
//