LOCUS VTS00447.1 274 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana phage integrase : Integrase OS=Pseudomonas
stutzeri MF28 GN=L686_08630 PE=4 SV=1: Phage_int_SAM_1:
Phage_integrase protein.
ACCESSION LR593886-7411
PROTEIN_ID VTS00447.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_81810"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|U3HUX1|U3HUX1_PSEST ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Integrase
OS=Pseudomonas stutzeri MF28 GN=L686_08630 PE=4 SV=1 ;
EVALUE=2e-38 ; Q/S_length_ratio=0.840"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A095LKF3|A0A095LKF3_BURPE ;
ALN/Q_length_ratio=0.931 ; DESCRIPTION=Uncharacterized
protein OS=Burkholderia pseudomallei GN=DP62_489 PE=4 SV=1
; EVALUE=4e-38 ; Q/S_length_ratio=0.864"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A0A031CNX7|A0A031CNX7_PSEAI ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Uncharacterized
protein OS=Pseudomonas aeruginosa BWH054 GN=V555_05234
PE=4 SV=1 ; EVALUE=5e-38 ; Q/S_length_ratio=0.840"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A0A0A5B8C0|A0A0A5B8C0_9BURK ;
ALN/Q_length_ratio=0.898 ; DESCRIPTION=Uncharacterized
protein OS=Burkholderia sp. MSHR44 GN=Y036_2887 PE=4 SV=1
; EVALUE=1e-37 ; Q/S_length_ratio=0.864"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|Q48B24|Q48B24_PSE14 ;
ALN/Q_length_ratio=0.942 ; DESCRIPTION=Site-specific
recombinase, phage integrase family OS=Pseudomonas
syringae pv. phaseolicola (strain 1448A / Race 6)
GN=PSPPH_B0017 PE=4 SV=1 ; EVALUE=1e-37 ;
Q/S_length_ratio=0.859"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|F3FN65|F3FN65_PSESX ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Phage integrase
OS=Pseudomonas syringae pv. japonica str. M301072
GN=PSYJA_22823 PE=4 SV=1 ; EVALUE=1e-37 ;
Q/S_length_ratio=0.856"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A098FL90|A0A098FL90_9PSED ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Phage
integrase:Phage integrase, N-terminal SAM-like protein
OS=Pseudomonas xanthomarina GN=PXNS11_140040 PE=4 SV=1 ;
EVALUE=2e-37 ; Q/S_length_ratio=0.843"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|S6UNC6|S6UNC6_PSESF ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Uncharacterized
protein OS=Pseudomonas syringae pv. actinidiae ICMP 18807
GN=A244_12066 PE=4 SV=1 ; EVALUE=2e-37 ;
Q/S_length_ratio=0.856"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A038G9R7|A0A038G9R7_PSESF ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Phage
integrase:Phage integrase, N-terminal SAM-like protein
OS=Pseudomonas syringae pv. actinidiae ICMP 18884
GN=IYO_23580 PE=4 SV=1 ; EVALUE=2e-37 ;
Q/S_length_ratio=0.856"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|Q93TD6|Q93TD6_PSEYM ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Uncharacterized
protein OS=Pseudomonas syringae pv. maculicola str. M6
PE=4 SV=1 ; EVALUE=2e-37 ; Q/S_length_ratio=0.856"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|Q4ZWE7|Q4ZWE7_PSEU2 ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Phage
integrase:Phage integrase, N-terminal SAM-like protein
OS=Pseudomonas syringae pv. syringae (strain B728a)
GN=Psyr_1475 PE=4 SV=1 ; EVALUE=2e-37 ;
Q/S_length_ratio=0.856"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|L8NBM1|L8NBM1_PSESY ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Phage integrase
family site-specific recombinase OS=Pseudomonas syringae
pv. syringae B64 GN=PSSB64_1227 PE=4 SV=1 ; EVALUE=2e-37 ;
Q/S_length_ratio=0.856"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|S3NQ33|S3NQ33_PSESY ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Phage integrase
family site-specific recombinase OS=Pseudomonas syringae
pv. syringae SM GN=PssSM_4757 PE=4 SV=1 ; EVALUE=2e-37 ;
Q/S_length_ratio=0.856"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|Q87WE3|Q87WE3_PSESM ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Site-specific
recombinase, phage integrase family OS=Pseudomonas
syringae pv. tomato (strain DC3000) GN=PSPTO_4608 PE=4
SV=1 ; EVALUE=2e-37 ; Q/S_length_ratio=0.856"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|I3W2L5|I3W2L5_PSESX ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Phage
integrase:Phage integrase, N-terminal SAM-like protein
OS=Pseudomonas syringae PE=4 SV=1 ; EVALUE=2e-37 ;
Q/S_length_ratio=0.813"
/note="Pfam_scan:hit_1 (2..57);
Pfam:PF02899.12:Phage_int_SAM_1;
Pfam_type:Domain;HMM_aln_Length:41; HMM_Length:84;
EVALUE:9.1e-05; BITSCORE: 22.5"
/note="Pfam_scan:hit_2 (81..263);
Pfam:PF00589.17:Phage_integrase;
Pfam_type:Family;HMM_aln_Length:168; HMM_Length:173;
EVALUE:1.5e-27; BITSCORE: 96.4"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0006259"
BEGIN
1 MAHAKIPAGA WDELPRVRPR HIAAWRDALL SAGLSNAAIT RKLSVVRSLF GYLRAYGYDG
61 LNPADTAFVA APPVPRDGKT VALTPEDCRR LLDAPALTTP EGIRDRALLA VLAFTGCRVG
121 ELSRLRVADY KTSGGHKVVE VRGKGGKERR IPLHPEAFER LDAWLEAAEL VGVAGPLFRP
181 LRTARGGGKS GFHTAPLSRR AVQALVERYV ARLKLDPNVT VHSFRATALT TARERGADIV
241 DLQDFAGHAD PRTTLGYIRN RDRLSRSPAY VLKY
//