LOCUS VTS00432.1 881 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana Conjugative relaxase domain protein
OS=Mucilaginibacter paludis DSM 18603 GN=Mucpa_5696 PE=
4 SV=1: TrwC: AAA_30: UvrD_C_2 protein.
ACCESSION LR593886-7406
PROTEIN_ID VTS00432.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_81860"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D2QCL6|D2QCL6_SPILD ;
ALN/Q_length_ratio=1.009 ; DESCRIPTION=Conjugative
relaxase domain protein OS=Spirosoma linguale (strain ATCC
33905 / DSM 74 / LMG 10896) GN=Slin_1976 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.959"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|I2GRL3|I2GRL3_9BACT ;
ALN/Q_length_ratio=0.985 ; DESCRIPTION=WGS project
CAIT00000000 data, contig 9 OS=Fibrisoma limi BUZ 3
GN=BN8_05888 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.960"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|L7C8U0|L7C8U0_RHOBT ;
ALN/Q_length_ratio=1.041 ; DESCRIPTION=Conjugative
relaxase domain protein OS=Rhodopirellula baltica SWK14
GN=RBSWK_05838 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.909"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|M2ADE1|M2ADE1_9PLAN ;
ALN/Q_length_ratio=0.980 ; DESCRIPTION=Conjugative
relaxase domain-containing protein OS=Rhodopirellula
europaea 6C GN=RE6C_04182 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.964"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A3ZVN0|A3ZVN0_9PLAN ;
ALN/Q_length_ratio=1.010 ; DESCRIPTION=Uncharacterized
protein OS=Blastopirellula marina DSM 3645
GN=DSM3645_02833 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.911"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|G8T8Z1|G8T8Z1_NIAKG ;
ALN/Q_length_ratio=0.982 ; DESCRIPTION=TrwC relaxase
OS=Niastella koreensis (strain DSM 17620 / KACC 11465 /
GR20-10) GN=Niako_6123 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.966"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M5S428|M5S428_9PLAN ;
ALN/Q_length_ratio=1.010 ; DESCRIPTION=Conjugative
relaxase domain-containing protein OS=Rhodopirellula
europaea SH398 GN=RESH_03016 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.909"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|K5D840|K5D840_RHOBT ;
ALN/Q_length_ratio=1.006 ; DESCRIPTION=Conjugative
relaxase domain protein OS=Rhodopirellula baltica SH28
GN=RBSH_01600 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.918"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|L7CIL8|L7CIL8_RHOBT ;
ALN/Q_length_ratio=1.010 ; DESCRIPTION=Conjugative
relaxase domain-containing protein OS=Rhodopirellula
baltica SWK14 GN=RBSWK_03158 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.910"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|G8TJH2|G8TJH2_NIAKG ;
ALN/Q_length_ratio=0.982 ; DESCRIPTION=Conjugative
relaxase domain protein OS=Niastella koreensis (strain DSM
17620 / KACC 11465 / GR20-10) GN=Niako_3401 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.975"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M5RXQ1|M5RXQ1_9PLAN ;
ALN/Q_length_ratio=1.006 ; DESCRIPTION=Conjugative
relaxase domain protein OS=Rhodopirellula europaea SH398
GN=RESH_05402 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.918"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A3ZP08|A3ZP08_9PLAN ;
ALN/Q_length_ratio=0.733 ; DESCRIPTION=Uncharacterized
protein OS=Blastopirellula marina DSM 3645
GN=DSM3645_27912 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.264"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|C7PJH8|C7PJH8_CHIPD ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=Conjugative
relaxase domain protein OS=Chitinophaga pinensis (strain
ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034)
GN=Cpin_6333 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|H1Y3J7|H1Y3J7_9SPHI ;
ALN/Q_length_ratio=1.005 ; DESCRIPTION=Conjugative
relaxase domain protein OS=Mucilaginibacter paludis DSM
18603 GN=Mucpa_5696 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.954"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|B5JHM8|B5JHM8_9BACT ;
ALN/Q_length_ratio=0.966 ; DESCRIPTION=TrwC relaxase
family OS=Verrucomicrobiae bacterium DG1235
GN=VDG1235_1372 PE=4 SV=1 ; EVALUE=1e-171 ;
Q/S_length_ratio=0.946"
/note="Pfam_scan:hit_1 (6..287); Pfam:PF08751.6:TrwC;
Pfam_type:Domain;HMM_aln_Length:289; HMM_Length:297;
EVALUE:7.7e-61; BITSCORE: 206.0"
/note="Pfam_scan:hit_2 (403..593); Pfam:PF13604.1:AAA_30;
Pfam_type:Domain;HMM_aln_Length:192; HMM_Length:196;
EVALUE:7.1e-44; BITSCORE: 149.7"
/note="Pfam_scan:hit_3 (714..816);
Pfam:PF13538.1:UvrD_C_2;
Pfam_type:Domain;HMM_aln_Length:100; HMM_Length:104;
EVALUE:4.1e-08; BITSCORE: 33.2"
BEGIN
1 MLRIVPTRSA AQAQSYYSHS DYYTGDQEHP GVWRGKGAER LGLSGIVEKE QFAALCENRD
61 PSSGERITAS TRANRTIGYD FNFHAPKSLS VLHALTDDPN LLRAFQESVD ATMDLIETDA
121 QTRVRKGYTY QDRTTGELVW ARFDHFTARP IGGVPDPHLH SHCFVQNMTF DRAEGQWKAG
181 QFRNLKRDAP FYQAVFHTEL TSRLRALGVP LEQTPEGWEV RGFDRATLDK FSRRTKQIED
241 LAAARGITDP DAKAELGAKT RRGKAEHLSM DELRALWFDR LDSHERAALR PLPPPVKPEP
301 AAGLEPRAAL AFACRHLFER RSVVSERELL AETLRAGLGR FTLADAERAV RDSDVLVREL
361 DGRRLATTRA VLVEEEQLIA FARDGRGRCA PLGRGDAVPR RGWLNAGQKA AVRHVLSSPD
421 RVMLIRGAAG TGKTTLMQEA VEAIERAGTR VLTFAPSADA SRGVLRKEGF TGADTVARLL
481 VDTELQERAR GQVLWIDEAG LLGATAMRGV FTLADRLACR VVLSGDRKQH GSVARGAVLK
541 VLEEQAGLAV AEVKEVQRQK GAYRRAVELL SEGRAAEGFD ALDRLGWVRE IADADRYTQL
601 AADYVAAVAS RKSALVVSPT HAEGAEATGA IRTALKAAGK LGTEERAIAT LTRVELTEAE
661 RTQANSYRTG DVLQFHQNAK GFALGQRVVV EPGISVPLDQ AARFQVFRPS ELILAPGDRV
721 RVTKGGKTKD GHKIENGGLF TVSGFTRAGD IRLDNGWIVD RDYGHLSHGY VTTSYASQGK
781 TVDRVLVAQS SRSGAAASRE QFYVSASRAR QQVTVYTDDK EALREAIGHS ADRLSATELV
841 GVEAHREQLR MRARLVRLLN RFRGHRPQPA RPDREYREGR A
//