LOCUS VTS00414.1 346 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana RNA-directed DNA polymerase (Reverse
transcriptase) OS=Thiothrix nivea DSM 5205 GN=Thini_3376
PE=4 SV=1: RVT_1 protein.
ACCESSION LR593886-7400
PROTEIN_ID VTS00414.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_81920"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|I3BWZ6|I3BWZ6_9GAMM ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=RNA-directed DNA
polymerase (Reverse transcriptase) OS=Thiothrix nivea DSM
5205 GN=Thini_3376 PE=4 SV=1 ; EVALUE=1e-95 ;
Q/S_length_ratio=1.033"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A011Q584|A0A011Q584_9PROT ;
ALN/Q_length_ratio=0.951 ; DESCRIPTION=Group II
intron-encoded protein LtrA OS=Candidatus Accumulibacter
sp. SK-11 GN=ltrA_3 PE=4 SV=1 ; EVALUE=8e-85 ;
Q/S_length_ratio=1.027"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|R6AP33|R6AP33_9BACT ;
ALN/Q_length_ratio=0.931 ; DESCRIPTION=Reverse
transcriptase family protein OS=Prevotella sp. CAG:5226
GN=BN693_01017 PE=4 SV=1 ; EVALUE=2e-79 ;
Q/S_length_ratio=1.027"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Q3APX9|Q3APX9_CHLCH ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=Reverse
transcriptase family protein OS=Chlorobium chlorochromatii
(strain CaD3) GN=Cag_1695 PE=4 SV=1 ; EVALUE=4e-79 ;
Q/S_length_ratio=1.006"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|C7RUW7|C7RUW7_ACCPU ;
ALN/Q_length_ratio=0.983 ; DESCRIPTION=Reverse
transcriptase family protein OS=Accumulibacter phosphatis
(strain UW-1) GN=CAP2UW1_3089 PE=4 SV=1 ; EVALUE=3e-78 ;
Q/S_length_ratio=1.009"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A084Y4U8|A0A084Y4U8_9PROT ;
ALN/Q_length_ratio=0.884 ; DESCRIPTION=Group II
intron-encoded protein LtrA OS=Candidatus Accumulibacter
sp. SK-01 GN=ltrA_1 PE=4 SV=1 ; EVALUE=6e-77 ;
Q/S_length_ratio=1.021"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|S3KH76|S3KH76_TREDN ;
ALN/Q_length_ratio=0.841 ; DESCRIPTION=Uncharacterized
protein OS=Treponema denticola SP32 GN=HMPREF9732_01609
PE=4 SV=1 ; EVALUE=1e-73 ; Q/S_length_ratio=1.055"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M2BQG6|M2BQG6_TREDN ;
ALN/Q_length_ratio=0.841 ; DESCRIPTION=Uncharacterized
protein OS=Treponema denticola SP33 GN=HMPREF9733_00297
PE=4 SV=1 ; EVALUE=1e-73 ; Q/S_length_ratio=1.055"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|S3K8T6|S3K8T6_TREDN ;
ALN/Q_length_ratio=0.792 ; DESCRIPTION=Uncharacterized
protein OS=Treponema denticola SP44 GN=HMPREF9734_01587
PE=4 SV=1 ; EVALUE=1e-71 ; Q/S_length_ratio=1.055"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M2D1H3|M2D1H3_TREDN ;
ALN/Q_length_ratio=0.792 ; DESCRIPTION=Uncharacterized
protein OS=Treponema denticola ATCC 33521
GN=HMPREF9735_00883 PE=4 SV=1 ; EVALUE=1e-71 ;
Q/S_length_ratio=1.055"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|S3KRD5|S3KRD5_TREDN ;
ALN/Q_length_ratio=0.792 ; DESCRIPTION=Uncharacterized
protein OS=Treponema denticola SP23 GN=HMPREF9731_01069
PE=4 SV=1 ; EVALUE=1e-71 ; Q/S_length_ratio=1.055"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q73KF2|Q73KF2_TREDE ;
ALN/Q_length_ratio=0.792 ; DESCRIPTION=Reverse
transcriptase family protein OS=Treponema denticola
(strain ATCC 35405 / CIP 103919 / DSM 14222) GN=TDE_2266
PE=4 SV=1 ; EVALUE=1e-71 ; Q/S_length_ratio=1.055"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M2BNF6|M2BNF6_TREDN ;
ALN/Q_length_ratio=0.792 ; DESCRIPTION=Uncharacterized
protein OS=Treponema denticola OTK GN=HMPREF9723_00677
PE=4 SV=1 ; EVALUE=1e-71 ; Q/S_length_ratio=1.055"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M2BPP5|M2BPP5_TREDN ;
ALN/Q_length_ratio=0.792 ; DESCRIPTION=Uncharacterized
protein OS=Treponema denticola SP37 GN=HMPREF9724_00221
PE=4 SV=1 ; EVALUE=1e-71 ; Q/S_length_ratio=1.055"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M2CN11|M2CN11_TREDN ;
ALN/Q_length_ratio=0.792 ; DESCRIPTION=Uncharacterized
protein OS=Treponema denticola ATCC 35404
GN=HMPREF9721_00946 PE=4 SV=1 ; EVALUE=1e-71 ;
Q/S_length_ratio=1.055"
/note="Pfam_scan:hit_1 (67..267); Pfam:PF00078.22:RVT_1;
Pfam_type:Family;HMM_aln_Length:205; HMM_Length:214;
EVALUE:4.3e-22; BITSCORE: 78.5"
BEGIN
1 MKRVTLGLDA VAAWDNLRLA ALKALRGKRA RPDARRFMYR LDARLHELRT QILAGTVTIG
61 RSHQFTIHDP KERLITAPCF GERVLHHAIM NVCEPVFDRG LIADSYACRR GKGRIACLRR
121 AQAIARCYPY FLKLDVRKYF DSINHQTLNE LLSRRFKNRG LLDLFGRIIA AHAASPGRGL
181 PIGSLTSQHF ANFYLGGCDR YVKEVLRRSG YVRYMDDMAV WADSSDTLRR TLVDIRAFLD
241 VRLGLAVKPD PYINRTRHGL DFLGCRVLPT HLVLSARSRR RYRRNLRAIE RAMARGEMSE
301 AEVQRRGQAV VSFARAAGVK SWRFRRRTLD QLAGEGPGVG AGSPGR
//