LOCUS VTS00229.1 426 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana radical sam domain protein : Radical
SAM domain protein OS=Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB) GN=Sfum_2032 PE=4 SV=1: Radical_SAM:
Fer4_14: SPASM protein.
ACCESSION LR593886-7338
PROTEIN_ID VTS00229.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_82540"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0LJW3|A0LJW3_SYNFM ;
ALN/Q_length_ratio=0.826 ; DESCRIPTION=Radical SAM domain
protein OS=Syntrophobacter fumaroxidans (strain DSM 10017
/ MPOB) GN=Sfum_2032 PE=4 SV=1 ; EVALUE=9e-41 ;
Q/S_length_ratio=1.036"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|K2E3D4|K2E3D4_9BACT ;
ALN/Q_length_ratio=0.831 ; DESCRIPTION=Radical SAM protein
OS=uncultured bacterium GN=ACD_20C00039G0011 PE=4 SV=1 ;
EVALUE=8e-33 ; Q/S_length_ratio=1.180"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D8F5J0|D8F5J0_9DELT ;
ALN/Q_length_ratio=0.810 ; DESCRIPTION=Radical SAM domain
protein OS=delta proteobacterium NaphS2 GN=NPH_1440 PE=4
SV=1 ; EVALUE=1e-31 ; Q/S_length_ratio=1.095"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A0A081BQH4|A0A081BQH4_9BACT ;
ALN/Q_length_ratio=0.796 ; DESCRIPTION=Radical SAM domain
protein OS=bacterium UASB14 GN=U14_03892 PE=4 SV=1 ;
EVALUE=3e-28 ; Q/S_length_ratio=1.092"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0LN29|A0LN29_SYNFM ;
ALN/Q_length_ratio=0.812 ; DESCRIPTION=Radical SAM domain
protein OS=Syntrophobacter fumaroxidans (strain DSM 10017
/ MPOB) GN=Sfum_3158 PE=4 SV=1 ; EVALUE=2e-27 ;
Q/S_length_ratio=0.995"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|Q46AF3|Q46AF3_METBF ;
ALN/Q_length_ratio=0.749 ; DESCRIPTION=Heme biosynthesis
protein (NirJ-2) OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=Mbar_A2213 PE=4 SV=1 ; EVALUE=3e-27 ;
Q/S_length_ratio=0.889"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K1ZLG4|K1ZLG4_9BACT ;
ALN/Q_length_ratio=0.826 ; DESCRIPTION=Radical SAM protein
OS=uncultured bacterium GN=ACD_63C00009G0003 PE=4 SV=1 ;
EVALUE=1e-26 ; Q/S_length_ratio=1.049"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|D5MFY8|D5MFY8_9BACT ;
ALN/Q_length_ratio=0.836 ; DESCRIPTION=Uncharacterized
protein OS=Candidatus Methylomirabilis oxyfera
GN=DAMO_1609 PE=4 SV=1 ; EVALUE=5e-26 ;
Q/S_length_ratio=1.065"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|R5HL66|R5HL66_9SPIR ;
ALN/Q_length_ratio=0.791 ; DESCRIPTION=Uncharacterized
protein OS=Brachyspira sp. CAG:484 GN=BN676_02109 PE=4
SV=1 ; EVALUE=8e-25 ; Q/S_length_ratio=1.200"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|R7LN64|R7LN64_9CLOT ;
ALN/Q_length_ratio=0.791 ; DESCRIPTION=Uncharacterized
protein OS=Clostridium sp. CAG:729 GN=BN768_00917 PE=4
SV=1 ; EVALUE=2e-24 ; Q/S_length_ratio=1.197"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M2ESX5|M2ESX5_STRMG ;
ALN/Q_length_ratio=0.770 ; DESCRIPTION=Putative coenzyme
PQQ synthesis protein OS=Streptococcus mutans 3SN1
GN=SMU26_08510 PE=4 SV=1 ; EVALUE=7e-24 ;
Q/S_length_ratio=1.148"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|U3SST2|U3SST2_STRMG ;
ALN/Q_length_ratio=0.770 ; DESCRIPTION=Putative coenzyme
PQQ synthesis protein OS=Streptococcus mutans LJ23
GN=SMULJ23_0611 PE=4 SV=1 ; EVALUE=3e-23 ;
Q/S_length_ratio=1.148"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M2FL02|M2FL02_STRMG ;
ALN/Q_length_ratio=0.770 ; DESCRIPTION=Putative coenzyme
PQQ synthesis protein OS=Streptococcus mutans A9
GN=SMU54_09268 PE=4 SV=1 ; EVALUE=3e-23 ;
Q/S_length_ratio=1.148"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M2GTZ3|M2GTZ3_STRMG ;
ALN/Q_length_ratio=0.770 ; DESCRIPTION=Putative coenzyme
PQQ synthesis protein OS=Streptococcus mutans N34
GN=SMU66_09597 PE=4 SV=1 ; EVALUE=3e-23 ;
Q/S_length_ratio=1.148"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|C6SPI0|C6SPI0_STRMN ;
ALN/Q_length_ratio=0.770 ; DESCRIPTION=Putative coenzyme
PQQ synthesis protein OS=Streptococcus mutans serotype c
(strain NN2025) GN=SmuNN2025_0596 PE=4 SV=1 ; EVALUE=3e-23
; Q/S_length_ratio=1.148"
/note="Pfam_scan:hit_1 (48..207);
Pfam:PF04055.16:Radical_SAM;
Pfam_type:Domain;HMM_aln_Length:137; HMM_Length:166;
EVALUE:1.4e-21; BITSCORE: 77.3"
/note="Pfam_scan:hit_2 (50..169); Pfam:PF13394.1:Fer4_14;
Pfam_type:Domain;HMM_aln_Length:85; HMM_Length:119;
EVALUE:4.2e-06; BITSCORE: 26.7"
/note="Pfam_scan:hit_3 (324..385); Pfam:PF13186.1:SPASM;
Pfam_type:Domain;HMM_aln_Length:63; HMM_Length:64;
EVALUE:1.7e-11; BITSCORE: 44.2"
/note="GO_domain:GO:0043167"
BEGIN
1 MRALLRPLAR LARRLTGVKA HHLKIPYAWI PYHLYDDGTA WAPLTVTLEL TYLCNLRCKM
61 CSLVEGNMVT PQGQRQNPEL READGTLRRE ISTEEYLDII RQIGRAGVKA VSLTGGEPTL
121 RRDIATLVAA IKKYPIHLSL ISNGSGKPEV YRELIDLGVD SITISVDGTR EVHDHVRGRE
181 GSFDKAVRAV RTIIDAKKAN SDRRPWLEVS CAVSALNQHD LENLVTWFEG YEIDMLNIGH
241 LHYSTAERQA ATERLVDGPI MHLKQPELPD RVVAVDTADL VERIARIRAS RGTGKVPVKF
301 MPELDADQIH RQYADPQFVH VNKCFHPWLA TRIDPWGQMY PCWIDIRLGD VRKRGFMALW
361 NSELYRKFRR NIREQKLLPK CATCPALTDK TWSSVPTLDR GLLQLGRRTL PIRKAVSTQR
421 EPVGVT
//