LOCUS VTR99907.1 122 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rna-binding protein : RNP-1 like RNA-
binding protein OS=Planctomyces limnophilus (strain ATCC
43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_1587 PE=4
SV=1: RRM_1 protein.
ACCESSION LR593886-7231
PROTEIN_ID VTR99907.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_83610"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D5SWS0|D5SWS0_PLAL2 ;
ALN/Q_length_ratio=0.672 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Planctomyces limnophilus (strain
ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_1587 PE=4
SV=1 ; EVALUE=2e-33 ; Q/S_length_ratio=0.836"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DDX1|L0DDX1_SINAD ;
ALN/Q_length_ratio=0.672 ; DESCRIPTION=RRM
domain-containing RNA-binding protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_3164 PE=4 SV=1 ; EVALUE=5e-32 ;
Q/S_length_ratio=0.853"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|E8R1A5|E8R1A5_ISOPI ;
ALN/Q_length_ratio=0.664 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Isosphaera pallida (strain ATCC
43644 / DSM 9630 / IS1B) GN=Isop_0720 PE=4 SV=1 ;
EVALUE=2e-30 ; Q/S_length_ratio=0.946"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|E8R6M4|E8R6M4_ISOPI ;
ALN/Q_length_ratio=0.639 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Isosphaera pallida (strain ATCC
43644 / DSM 9630 / IS1B) GN=Isop_2358 PE=4 SV=1 ;
EVALUE=3e-28 ; Q/S_length_ratio=1.173"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0LED5|A0LED5_SYNFM ;
ALN/Q_length_ratio=0.689 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB) GN=Sfum_0084 PE=4 SV=1 ;
EVALUE=3e-26 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|B9XRV6|B9XRV6_PEDPL ;
ALN/Q_length_ratio=0.705 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Pedosphaera parvula (strain
Ellin514) GN=Cflav_PD0260 PE=4 SV=1 ; EVALUE=7e-25 ;
Q/S_length_ratio=1.034"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K5C9M0|K5C9M0_RHOBT ;
ALN/Q_length_ratio=0.697 ; DESCRIPTION=Protein containing
RNA recognition motif, RNP-1 domain protein
OS=Rhodopirellula baltica SH28 GN=RBSH_04923 PE=4 SV=1 ;
EVALUE=5e-24 ; Q/S_length_ratio=0.646"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|L7CIW2|L7CIW2_RHOBT ;
ALN/Q_length_ratio=0.730 ; DESCRIPTION=Protein containing
RNA recognition motif, RNP-1 domain protein
OS=Rhodopirellula baltica SWK14 GN=RBSWK_02084 PE=4 SV=1 ;
EVALUE=2e-23 ; Q/S_length_ratio=0.622"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|Q7UEZ2|Q7UEZ2_RHOBA ;
ALN/Q_length_ratio=0.730 ; DESCRIPTION=RNA-binding protein
OS=Rhodopirellula baltica (strain SH1) GN=grp PE=4 SV=1 ;
EVALUE=2e-23 ; Q/S_length_ratio=0.592"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A0A0DP58|A0A0A0DP58_9BURK ;
ALN/Q_length_ratio=0.705 ; DESCRIPTION=RNA-binding protein
OS=Aquabacterium sp. NJ1 GN=JY96_11020 PE=4 SV=1 ;
EVALUE=2e-23 ; Q/S_length_ratio=0.762"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M2AZR6|M2AZR6_9PLAN ;
ALN/Q_length_ratio=0.730 ; DESCRIPTION=Protein containing
RNA recognition motif, RNP-1 domain protein
OS=Rhodopirellula europaea 6C GN=RE6C_04245 PE=4 SV=1 ;
EVALUE=2e-23 ; Q/S_length_ratio=0.626"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|F2AWM0|F2AWM0_RHOBT ;
ALN/Q_length_ratio=0.730 ; DESCRIPTION=Protein containing
RNA recognition motif, RNP-1 domains OS=Rhodopirellula
baltica WH47 GN=RBWH47_00759 PE=4 SV=1 ; EVALUE=2e-23 ;
Q/S_length_ratio=0.626"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M5TAI8|M5TAI8_9PLAN ;
ALN/Q_length_ratio=0.680 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Rhodopirellula sp. SWK7
GN=RRSWK_04730 PE=4 SV=1 ; EVALUE=2e-23 ;
Q/S_length_ratio=0.938"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M5S3Z3|M5S3Z3_9PLAN ;
ALN/Q_length_ratio=0.730 ; DESCRIPTION=RNA recognition
motif, RNP-1 domain protein OS=Rhodopirellula europaea
SH398 GN=RESH_03139 PE=4 SV=1 ; EVALUE=2e-23 ;
Q/S_length_ratio=0.626"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|L0DL85|L0DL85_SINAD ;
ALN/Q_length_ratio=0.697 ; DESCRIPTION=RRM
domain-containing RNA-binding protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_5259 PE=4 SV=1 ; EVALUE=5e-23 ;
Q/S_length_ratio=0.938"
/note="Pfam_scan:hit_1 (5..73); Pfam:PF00076.17:RRM_1;
Pfam_type:Domain;HMM_aln_Length:68; HMM_Length:70;
EVALUE:6.1e-20; BITSCORE: 70.6"
/note="GO_domain:GO:0003674"
BEGIN
1 MAKKLYVGNI SFQTTSDDLV QAFSQYGTVL GAQIVSDRET GRSRGFAFVE MHDGGDEAIA
61 ALNGAQLGGR TLTVNEAKPR EERPRTGGGG YGGGGGGGYG GGRGGSGGGY GGGRGGSGGG
121 RY
//