LOCUS VTR99880.1 413 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana leucine-rich repeat-containing protein
typical subtype : Uncharacterized protein OS=Nitrospina
gracilis (strain 3/211) GN=NITGR_1010043 PE=4 SV=1: LRR_7:
LRR_6: LRR_6 protein.
ACCESSION LR593886-7222
PROTEIN_ID VTR99880.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_83700"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|M1YUR4|M1YUR4_NITG3 ;
ALN/Q_length_ratio=0.346 ; DESCRIPTION=Uncharacterized
protein OS=Nitrospina gracilis (strain 3/211)
GN=NITGR_1010043 PE=4 SV=1 ; EVALUE=3e-19 ;
Q/S_length_ratio=2.174"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|E8R012|E8R012_ISOPI ;
ALN/Q_length_ratio=0.632 ; DESCRIPTION=Repeat-companion
domain protein OS=Isosphaera pallida (strain ATCC 43644 /
DSM 9630 / IS1B) GN=Isop_0537 PE=4 SV=1 ; EVALUE=5e-16 ;
Q/S_length_ratio=1.307"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A9AVT3|A9AVT3_HERA2 ;
ALN/Q_length_ratio=0.637 ; DESCRIPTION=Leucine-rich
repeat-containing protein typical subtype OS=Herpetosiphon
aurantiacus (strain ATCC 23779 / DSM 785) GN=Haur_4051
PE=4 SV=1 ; EVALUE=7e-16 ; Q/S_length_ratio=1.032"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|M1Z1Z0|M1Z1Z0_NITG3 ;
ALN/Q_length_ratio=0.511 ; DESCRIPTION=Uncharacterized
protein OS=Nitrospina gracilis (strain 3/211)
GN=NITGR_780018 PE=4 SV=1 ; EVALUE=7e-16 ;
Q/S_length_ratio=1.391"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D2VFY1|D2VFY1_NAEGR ;
ALN/Q_length_ratio=0.649 ; DESCRIPTION=Predicted protein
OS=Naegleria gruberi GN=NAEGRDRAFT_49212 PE=4 SV=1 ;
EVALUE=1e-14 ; Q/S_length_ratio=0.589"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|D2V4Z4|D2V4Z4_NAEGR ;
ALN/Q_length_ratio=0.712 ; DESCRIPTION=Leucine-rich
repeat, typical subtype-like protein OS=Naegleria gruberi
GN=NAEGRDRAFT_46752 PE=4 SV=1 ; EVALUE=2e-14 ;
Q/S_length_ratio=0.750"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A077FGR5|A0A077FGR5_9RICK ;
ALN/Q_length_ratio=0.562 ; DESCRIPTION=Ran
GTPase-activating protein (RanGAP) involved in mRNA
processing and transport OS=Rickettsiales bacterium Ac37b
GN=NOVO_01235 PE=4 SV=1 ; EVALUE=8e-14 ;
Q/S_length_ratio=0.604"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|D2V2A4|D2V2A4_NAEGR ;
ALN/Q_length_ratio=0.448 ; DESCRIPTION=Leucine-rich
repeat, typical subtype OS=Naegleria gruberi
GN=NAEGRDRAFT_62933 PE=4 SV=1 ; EVALUE=1e-13 ;
Q/S_length_ratio=1.128"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M1Z3C3|M1Z3C3_NITG3 ;
ALN/Q_length_ratio=0.709 ; DESCRIPTION=Uncharacterized
protein OS=Nitrospina gracilis (strain 3/211)
GN=NITGR_980084 PE=4 SV=1 ; EVALUE=3e-13 ;
Q/S_length_ratio=1.119"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|E8QY08|E8QY08_ISOPI ;
ALN/Q_length_ratio=0.828 ; DESCRIPTION=Repeat-companion
domain protein OS=Isosphaera pallida (strain ATCC 43644 /
DSM 9630 / IS1B) GN=Isop_0392 PE=4 SV=1 ; EVALUE=3e-13 ;
Q/S_length_ratio=0.939"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M1YYN4|M1YYN4_NITG3 ;
ALN/Q_length_ratio=0.436 ; DESCRIPTION=Uncharacterized
protein OS=Nitrospina gracilis (strain 3/211)
GN=NITGR_410002 PE=4 SV=1 ; EVALUE=6e-13 ;
Q/S_length_ratio=0.833"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M9WTR6|M9WTR6_9RICK ;
ALN/Q_length_ratio=0.419 ; DESCRIPTION=Ankyrin repeat
domain protein OS=Wolbachia endosymbiont of Drosophila
simulans wHa GN=wHa_02660 PE=4 SV=1 ; EVALUE=6e-13 ;
Q/S_length_ratio=0.453"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M1Z160|M1Z160_NITG3 ;
ALN/Q_length_ratio=0.605 ; DESCRIPTION=Uncharacterized
protein OS=Nitrospina gracilis (strain 3/211)
GN=NITGR_780005 PE=4 SV=1 ; EVALUE=7e-13 ;
Q/S_length_ratio=1.279"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D2VP72|D2VP72_NAEGR ;
ALN/Q_length_ratio=0.644 ; DESCRIPTION=Predicted protein
OS=Naegleria gruberi GN=NAEGRDRAFT_70753 PE=4 SV=1 ;
EVALUE=1e-12 ; Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M1YZK5|M1YZK5_NITG3 ;
ALN/Q_length_ratio=0.436 ; DESCRIPTION=Uncharacterized
protein OS=Nitrospina gracilis (strain 3/211)
GN=NITGR_50008 PE=4 SV=1 ; EVALUE=3e-12 ;
Q/S_length_ratio=1.553"
/note="Pfam_scan:hit_1 (223..241); Pfam:PF13504.1:LRR_7;
Pfam_type:Repeat;HMM_aln_Length:13; HMM_Length:17;
EVALUE:0.34; BITSCORE: 11.2"
/note="Pfam_scan:hit_2 (249..272); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:19; HMM_Length:24;
EVALUE:0.0082; BITSCORE: 16.1"
/note="Pfam_scan:hit_3 (328..351); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:22; HMM_Length:24;
EVALUE:0.0039; BITSCORE: 17.1"
/note="GO_domain:GO:0003674"
BEGIN
1 MNDRDALYRA VLDNPDDDTL RLVYADALEE SGDPRRATFI RTHVELSRIP EYDPASIARR
61 HNQKKKTTGE RWVPDLPSLP DGLSWGRDPF RRGMLGTIQA TNGAAFVANA DELFELYPIE
121 SLELSDTRLV DTAELAACHW LNRIRHLALV QGASGPAVRR LLDSEHFERL TAIHLGPELT
181 TSATVAATVR SRVFGRLTDL SVHEDRRGGG SFVGELSRLA APPKLKRLDL SSNRLTAESL
241 DRLTASAVLG TIEELDLSDN NLGAEGLTVL SGATLPNLRA LHLLRTRPTV EGVAALVGAG
301 FFPELRSLSL GGNNLASTAA TWIAGAPASN LRVLNLHENR VGDRGAESLA KSANLVGLLV
361 LDVAEAHIGD AGAEALARSE HLSNLMYLNL YGNAIDPAPV GRLRKRFGDR VFL
//