LOCUS VTR99565.1 171 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana 30s ribosomal protein s5 : 30S ribosomal
protein S5 OS=Singulisphaera acidiphila (strain ATCC BAA-
1392 / DSM 18658 / VKM B-2454 / MOB10) GN=rpsE PE=3 SV=
1: Ribosomal_S5: Ribosomal_S5_C protein.
ACCESSION LR593886-7117
PROTEIN_ID VTR99565.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_84750"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0D7W9|L0D7W9_SINAD ;
ALN/Q_length_ratio=0.942 ; DESCRIPTION=30S ribosomal
protein S5 OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=rpsE PE=3
SV=1 ; EVALUE=5e-65 ; Q/S_length_ratio=1.062"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|E8R476|E8R476_ISOPI ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=30S ribosomal
protein S5 OS=Isosphaera pallida (strain ATCC 43644 / DSM
9630 / IS1B) GN=rpsE PE=3 SV=1 ; EVALUE=1e-61 ;
Q/S_length_ratio=1.024"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A3ZLF3|A3ZLF3_9PLAN ;
ALN/Q_length_ratio=0.982 ; DESCRIPTION=30S ribosomal
protein S5 OS=Blastopirellula marina DSM 3645 GN=rpsE PE=3
SV=1 ; EVALUE=2e-58 ; Q/S_length_ratio=1.018"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|F0SJA2|F0SJA2_PLABD ;
ALN/Q_length_ratio=0.860 ; DESCRIPTION=30S ribosomal
protein S5 OS=Planctomyces brasiliensis (strain ATCC 49424
/ DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=rpsE
PE=3 SV=1 ; EVALUE=6e-58 ; Q/S_length_ratio=1.075"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|X0TWH8|X0TWH8_9ZZZZ ;
ALN/Q_length_ratio=0.924 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_L04082 OS=marine sediment
metagenome GN=S01H1_11577 PE=3 SV=1 ; EVALUE=6e-56 ;
Q/S_length_ratio=1.069"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A6CGP6|A6CGP6_9PLAN ;
ALN/Q_length_ratio=0.871 ; DESCRIPTION=30S ribosomal
protein S5 OS=Planctomyces maris DSM 8797 GN=rpsE PE=3
SV=1 ; EVALUE=1e-55 ; Q/S_length_ratio=1.075"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|D5SQ91|D5SQ91_PLAL2 ;
ALN/Q_length_ratio=0.901 ; DESCRIPTION=30S ribosomal
protein S5 OS=Planctomyces limnophilus (strain ATCC 43296
/ DSM 3776 / IFAM 1008 / 290) GN=rpsE PE=3 SV=1 ;
EVALUE=4e-54 ; Q/S_length_ratio=1.075"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5RDF5|M5RDF5_9PLAN ;
ALN/Q_length_ratio=0.883 ; DESCRIPTION=30S ribosomal
protein S5 OS=Rhodopirellula maiorica SM1 GN=rpsE PE=3
SV=1 ; EVALUE=3e-53 ; Q/S_length_ratio=1.096"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|X0UNC6|X0UNC6_9ZZZZ ;
ALN/Q_length_ratio=0.971 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_S11655 OS=marine sediment
metagenome GN=S01H1_41647 PE=3 SV=1 ; EVALUE=3e-53 ;
Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5UQQ9|M5UQQ9_9PLAN ;
ALN/Q_length_ratio=0.877 ; DESCRIPTION=30S ribosomal
protein S5 OS=Rhodopirellula sallentina SM41 GN=rpsE PE=3
SV=1 ; EVALUE=3e-52 ; Q/S_length_ratio=0.961"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M5SUL2|M5SUL2_9PLAN ;
ALN/Q_length_ratio=0.871 ; DESCRIPTION=30S ribosomal
protein S5 OS=Rhodopirellula sp. SWK7 GN=rpsE PE=3 SV=1 ;
EVALUE=3e-52 ; Q/S_length_ratio=0.961"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|L7CKS7|L7CKS7_RHOBT ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=30S ribosomal
protein S5 OS=Rhodopirellula baltica SWK14 GN=rpsE PE=3
SV=1 ; EVALUE=1e-51 ; Q/S_length_ratio=0.966"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M5S543|M5S543_9PLAN ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=30S ribosomal
protein S5 OS=Rhodopirellula europaea SH398 GN=rpsE PE=3
SV=1 ; EVALUE=1e-51 ; Q/S_length_ratio=0.966"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|F2AT52|F2AT52_RHOBT ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=30S ribosomal
protein S5 OS=Rhodopirellula baltica WH47 GN=rpsE PE=3
SV=1 ; EVALUE=1e-51 ; Q/S_length_ratio=0.966"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|K5D0J6|K5D0J6_RHOBT ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=30S ribosomal
protein S5 OS=Rhodopirellula baltica SH28 GN=rpsE PE=3
SV=1 ; EVALUE=1e-51 ; Q/S_length_ratio=0.966"
/note="Pfam_scan:hit_1 (17..82);
Pfam:PF00333.15:Ribosomal_S5;
Pfam_type:Domain;HMM_aln_Length:59; HMM_Length:67;
EVALUE:2.6e-20; BITSCORE: 71.9"
/note="Pfam_scan:hit_2 (95..168);
Pfam:PF03719.10:Ribosomal_S5_C;
Pfam_type:Domain;HMM_aln_Length:73; HMM_Length:74;
EVALUE:4e-28; BITSCORE: 96.4"
/note="GO_domain:GO:0003723"
/note="GO_domain:GO:0003735"
/note="GO_domain:GO:0042254"
/note="GO_domain:GO:0005840"
/note="GO_domain:GO:0006412"
BEGIN
1 MARERRDRGE GDSRDNALVD FVVKIRRSAC VVKGGRRFSF NALVVVGDRR GKVSYGYGKA
61 NEVPPAVEKA IKEGEGNVQR SKKIAVRGST IPHRVIGKYG ASKVILVPAG PGTGVKAGPG
121 VREVLQACGI TNILTKVHGS TNPLNLVKAT LAGLTQLRTK EDVAQLRGVQ L
//