LOCUS VTR99550.1 127 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana 30s ribosomal protein s13 : 30S ribosomal
protein S13 OS=Planctomyces limnophilus (strain ATCC 43296
/ DSM 3776 / IFAM 1008 / 290) GN=rpsM PE=3 SV=1: Ribosomal_S13
protein.
ACCESSION LR593886-7112
PROTEIN_ID VTR99550.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_84800"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D5SQ94|D5SQ94_PLAL2 ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=30S ribosomal
protein S13 OS=Planctomyces limnophilus (strain ATCC 43296
/ DSM 3776 / IFAM 1008 / 290) GN=rpsM PE=3 SV=1 ;
EVALUE=2e-56 ; Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|E8R480|E8R480_ISOPI ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=30S ribosomal
protein S13 OS=Isosphaera pallida (strain ATCC 43644 / DSM
9630 / IS1B) GN=rpsM PE=3 SV=1 ; EVALUE=9e-55 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D2R6J2|D2R6J2_PIRSD ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=30S ribosomal
protein S13 OS=Pirellula staleyi (strain ATCC 27377 / DSM
6068 / ICPB 4128) GN=rpsM PE=3 SV=1 ; EVALUE=7e-50 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_4 ; ACCESSION=Q7UIC7 ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=30S ribosomal
protein S13 OS=Rhodopirellula baltica (strain SH1) GN=rpsM
PE=3 SV=1 ; EVALUE=9e-49 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|F0SJA8|F0SJA8_PLABD ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=30S ribosomal
protein S13 OS=Planctomyces brasiliensis (strain ATCC
49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
GN=rpsM PE=3 SV=1 ; EVALUE=9e-49 ; Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A6CGQ1|A6CGQ1_9PLAN ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=30S ribosomal
protein S13 OS=Planctomyces maris DSM 8797 GN=rpsM PE=3
SV=1 ; EVALUE=2e-48 ; Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|L0D7W4|L0D7W4_SINAD ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=30S ribosomal
protein S13 OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=rpsM PE=3
SV=1 ; EVALUE=8e-48 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5TJL7|M5TJL7_9PLAN ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=30S ribosomal
protein S13 OS=Rhodopirellula sp. SWK7 GN=rpsM PE=3 SV=1 ;
EVALUE=2e-47 ; Q/S_length_ratio=1.033"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M5U0I4|M5U0I4_9PLAN ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=30S ribosomal
protein S13 OS=Rhodopirellula sallentina SM41 GN=rpsM PE=3
SV=1 ; EVALUE=2e-47 ; Q/S_length_ratio=1.033"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5RLX4|M5RLX4_9PLAN ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=30S ribosomal
protein S13 OS=Rhodopirellula maiorica SM1 GN=rpsM PE=3
SV=1 ; EVALUE=8e-47 ; Q/S_length_ratio=1.033"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A3ZKW6|A3ZKW6_9PLAN ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=30S ribosomal
protein S13 OS=Blastopirellula marina DSM 3645 GN=rpsM
PE=3 SV=1 ; EVALUE=3e-46 ; Q/S_length_ratio=1.033"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|I0IGZ9|I0IGZ9_PHYMF ;
ALN/Q_length_ratio=0.976 ; DESCRIPTION=30S ribosomal
protein S13 OS=Phycisphaera mikurensis (strain NBRC 102666
/ KCTC 22515 / FYK2301M01) GN=rpsM PE=3 SV=1 ;
EVALUE=3e-46 ; Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|F2AXP2|F2AXP2_RHOBT ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=30S ribosomal
protein S13 OS=Rhodopirellula baltica WH47 GN=rpsM PE=3
SV=1 ; EVALUE=7e-46 ; Q/S_length_ratio=1.033"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|K5EEH6|K5EEH6_RHOBT ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=30S ribosomal
protein S13 OS=Rhodopirellula baltica SH28 GN=rpsM PE=3
SV=1 ; EVALUE=7e-46 ; Q/S_length_ratio=1.033"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|L7C8B7|L7C8B7_RHOBT ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=30S ribosomal
protein S13 OS=Rhodopirellula baltica SWK14 GN=rpsM PE=3
SV=1 ; EVALUE=7e-46 ; Q/S_length_ratio=1.033"
/note="Pfam_scan:hit_1 (3..109);
Pfam:PF00416.17:Ribosomal_S13;
Pfam_type:Family;HMM_aln_Length:106; HMM_Length:107;
EVALUE:1.9e-31; BITSCORE: 108.6"
/note="GO_domain:GO:0003723"
/note="GO_domain:GO:0003735"
/note="GO_domain:GO:0042254"
/note="GO_domain:GO:0005840"
/note="GO_domain:GO:0006412"
BEGIN
1 MPRIQGVDIP PDKPTHISLR YIRGLGPTTS LEVCEKLKID PQRRAKELND KEIAEIAVLL
61 DKEYLVEGPL RRVEGGNIAR LKEIKCYRGE RHRKNLPVRG QRSKTNARTR KGIRKTVAGK
121 KGVKDMR
//