LOCUS VTR99544.1 212 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana 30s ribosomal protein s4 : 30S ribosomal
protein S4 OS=Singulisphaera acidiphila (strain ATCC BAA-
1392 / DSM 18658 / VKM B-2454 / MOB10) GN=rpsD PE=3 SV=
1: Ribosomal_S4: S4 protein.
ACCESSION LR593886-7110
PROTEIN_ID VTR99544.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_84820"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0D8F3|L0D8F3_SINAD ;
ALN/Q_length_ratio=0.986 ; DESCRIPTION=30S ribosomal
protein S4 OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=rpsD PE=3
SV=1 ; EVALUE=6e-77 ; Q/S_length_ratio=1.014"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D3T4M8|D3T4M8_THEIA ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=30S ribosomal
protein S4 OS=Thermoanaerobacter italicus (strain DSM 9252
/ Ab9) GN=rpsD PE=3 SV=1 ; EVALUE=5e-76 ;
Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D7ARQ1|D7ARQ1_THEM3 ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=30S ribosomal
protein S4 OS=Thermoanaerobacter mathranii (strain DSM
11426 / CIP 108742 / A3) GN=rpsD PE=3 SV=1 ; EVALUE=5e-76
; Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|E8R482|E8R482_ISOPI ;
ALN/Q_length_ratio=0.986 ; DESCRIPTION=30S ribosomal
protein S4 OS=Isosphaera pallida (strain ATCC 43644 / DSM
9630 / IS1B) GN=rpsD PE=3 SV=1 ; EVALUE=2e-75 ;
Q/S_length_ratio=1.014"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|G2MVS6|G2MVS6_9THEO ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=30S ribosomal
protein S4 OS=Thermoanaerobacter wiegelii Rt8.B1 GN=rpsD
PE=3 SV=1 ; EVALUE=2e-74 ; Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|M8CVS0|M8CVS0_THETY ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=30S ribosomal
protein S4 OS=Thermoanaerobacter thermohydrosulfuricus WC1
GN=rpsD PE=3 SV=1 ; EVALUE=2e-74 ; Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|F1ZVV7|F1ZVV7_THEET ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=30S ribosomal
protein S4 OS=Thermoanaerobacter ethanolicus JW 200
GN=rpsD PE=3 SV=1 ; EVALUE=2e-74 ; Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|I8QXL3|I8QXL3_9THEO ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=30S ribosomal
protein S4 OS=Thermoanaerobacter siderophilus SR4 GN=rpsD
PE=3 SV=1 ; EVALUE=2e-74 ; Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_10 ; ACCESSION=Q8R7Y1 ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=30S ribosomal
protein S4 OS=Caldanaerobacter subterraneus subsp.
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824
/ MB4) GN=rpsD PE=3 SV=1 ; EVALUE=9e-74 ;
Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|U5CS96|U5CS96_THEYO ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=30S ribosomal
protein S4 OS=Caldanaerobacter subterraneus subsp.
yonseiensis KB-1 GN=rpsD PE=3 SV=1 ; EVALUE=9e-74 ;
Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|E1SZG5|E1SZG5_THESX ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=30S ribosomal
protein S4 OS=Thermoanaerobacter sp. (strain X513) GN=rpsD
PE=3 SV=1 ; EVALUE=2e-73 ; Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_15 ; ACCESSION=B0K5S0 ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=30S ribosomal
protein S4 OS=Thermoanaerobacter sp. (strain X514) GN=rpsD
PE=3 SV=1 ; EVALUE=2e-73 ; Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|C7IUT8|C7IUT8_THEET ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=30S ribosomal
protein S4 OS=Thermoanaerobacter ethanolicus CCSD1 GN=rpsD
PE=3 SV=1 ; EVALUE=2e-73 ; Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|E1FFJ1|E1FFJ1_9THEO ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=30S ribosomal
protein S4 OS=Thermoanaerobacter sp. X561 GN=rpsD PE=3
SV=1 ; EVALUE=2e-73 ; Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|E8UV11|E8UV11_THEBF ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=30S ribosomal
protein S4 OS=Thermoanaerobacter brockii subsp. finnii
(strain ATCC 43586 / DSM 3389 / AKO-1) GN=rpsD PE=3 SV=1 ;
EVALUE=2e-73 ; Q/S_length_ratio=1.029"
/note="Pfam_scan:hit_1 (2..97);
Pfam:PF00163.14:Ribosomal_S4;
Pfam_type:Family;HMM_aln_Length:93; HMM_Length:94;
EVALUE:2.2e-19; BITSCORE: 69.6"
/note="Pfam_scan:hit_2 (98..145); Pfam:PF01479.20:S4;
Pfam_type:Domain;HMM_aln_Length:47; HMM_Length:48;
EVALUE:4.3e-18; BITSCORE: 64.4"
/note="GO_domain:GO:0003735"
/note="GO_domain:GO:0042254"
/note="GO_domain:GO:0005840"
/note="GO_domain:GO:0019843"
/note="GO_domain:GO:0006412"
BEGIN
1 MARNTDPVCK MCRREQMKLF LKGDRCFSPK CPIDRESLPP GMHGARRSKT SEYGIRLREK
61 QKLKRFYGVL EAQFRRYYTL ATRATGNTGE QLLSILERRL DNVVHRLGFA INRNSGRQMV
121 AHGHVLVNGV KCDIPSMLVK PGDIIKVKGR DSSLKMARET LAKGAVRIPD FLELTGNQDA
181 PEGRMTRIPS RQDVDERITD IREQLIIEIA TR
//