LOCUS VTR99541.1 335 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dna-directed rna polymerase subunit
alpha : DNA-directed RNA polymerase subunit alpha OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=rpoA PE=3 SV=1: RNA_pol_L: RNA_pol_A_bac:
RNA_pol_A_CTD protein.
ACCESSION LR593886-7109
PROTEIN_ID VTR99541.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_84830"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0D7S4|L0D7S4_SINAD ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=DNA-directed RNA
polymerase subunit alpha OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=rpoA PE=3 SV=1 ; EVALUE=1e-161 ;
Q/S_length_ratio=1.006"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|E8R483|E8R483_ISOPI ;
ALN/Q_length_ratio=0.997 ; DESCRIPTION=DNA-directed RNA
polymerase subunit alpha OS=Isosphaera pallida (strain
ATCC 43644 / DSM 9630 / IS1B) GN=rpoA PE=3 SV=1 ;
EVALUE=1e-149 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|F0SJB0|F0SJB0_PLABD ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=DNA-directed RNA
polymerase subunit alpha OS=Planctomyces brasiliensis
(strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 /
IFAM 1448) GN=rpoA PE=3 SV=1 ; EVALUE=1e-149 ;
Q/S_length_ratio=0.991"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D2R6J4|D2R6J4_PIRSD ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=DNA-directed RNA
polymerase subunit alpha OS=Pirellula staleyi (strain ATCC
27377 / DSM 6068 / ICPB 4128) GN=rpoA PE=3 SV=1 ;
EVALUE=1e-149 ; Q/S_length_ratio=1.015"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D5SQ96|D5SQ96_PLAL2 ;
ALN/Q_length_ratio=0.988 ; DESCRIPTION=DNA-directed RNA
polymerase subunit alpha OS=Planctomyces limnophilus
(strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=rpoA
PE=3 SV=1 ; EVALUE=1e-144 ; Q/S_length_ratio=0.997"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|L7C9V6|L7C9V6_RHOBT ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=DNA-directed RNA
polymerase subunit alpha OS=Rhodopirellula baltica SWK14
GN=rpoA PE=3 SV=1 ; EVALUE=1e-143 ;
Q/S_length_ratio=1.018"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K5DN29|K5DN29_RHOBT ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=DNA-directed RNA
polymerase subunit alpha OS=Rhodopirellula baltica SH28
GN=rpoA PE=3 SV=1 ; EVALUE=1e-143 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|F2AXP0|F2AXP0_RHOBT ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=DNA-directed RNA
polymerase subunit alpha OS=Rhodopirellula baltica WH47
GN=rpoA PE=3 SV=1 ; EVALUE=1e-143 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5S6I0|M5S6I0_9PLAN ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=DNA-directed RNA
polymerase subunit alpha OS=Rhodopirellula europaea SH398
GN=rpoA PE=3 SV=1 ; EVALUE=1e-143 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M2AGP5|M2AGP5_9PLAN ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=DNA-directed RNA
polymerase subunit alpha OS=Rhodopirellula europaea 6C
GN=rpoA PE=3 SV=1 ; EVALUE=1e-143 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_11 ; ACCESSION=Q7UIC5 ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=DNA-directed RNA
polymerase subunit alpha OS=Rhodopirellula baltica (strain
SH1) GN=rpoA PE=3 SV=1 ; EVALUE=1e-143 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M5RLW0|M5RLW0_9PLAN ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=DNA-directed RNA
polymerase subunit alpha OS=Rhodopirellula maiorica SM1
GN=rpoA PE=3 SV=1 ; EVALUE=1e-143 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M5UA96|M5UA96_9PLAN ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=DNA-directed RNA
polymerase subunit alpha OS=Rhodopirellula sallentina SM41
GN=rpoA PE=3 SV=1 ; EVALUE=1e-142 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M5TPT0|M5TPT0_9PLAN ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=DNA-directed RNA
polymerase subunit alpha OS=Rhodopirellula sp. SWK7
GN=rpoA PE=3 SV=1 ; EVALUE=1e-142 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A3ZKW4|A3ZKW4_9PLAN ;
ALN/Q_length_ratio=0.964 ; DESCRIPTION=DNA-directed RNA
polymerase subunit alpha OS=Blastopirellula marina DSM
3645 GN=rpoA PE=3 SV=1 ; EVALUE=1e-138 ;
Q/S_length_ratio=1.021"
/note="Pfam_scan:hit_1 (30..227);
Pfam:PF01193.19:RNA_pol_L;
Pfam_type:Domain;HMM_aln_Length:64; HMM_Length:66;
EVALUE:4.2e-22; BITSCORE: 77.0"
/note="Pfam_scan:hit_2 (61..176);
Pfam:PF01000.21:RNA_pol_A_bac;
Pfam_type:Domain;HMM_aln_Length:103; HMM_Length:112;
EVALUE:5.2e-17; BITSCORE: 62.0"
/note="Pfam_scan:hit_3 (255..321);
Pfam:PF03118.10:RNA_pol_A_CTD;
Pfam_type:Domain;HMM_aln_Length:61; HMM_Length:67;
EVALUE:1.3e-22; BITSCORE: 78.9"
/note="GO_domain:GO:0044281"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0016779"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0005730"
/note="Enzyme_Code:EC:2.7.7.6"
BEGIN
1 MRVRWRGLEL PSRVQADRST LTDVYGKFHA EPFEKGFGMT LGNSLRRILL SSLEGSAITR
61 VKIQGVQHEI STITGVVEDV TDIILNVKSL VVKNLSDQPK TIRIQKHEAG SVRGVDVQHD
121 ESIQIINPEH HIATLTSDVP FVMEMTVENG RGYRTADDNA GKEREVGVIP VDSSFSPVVR
181 VKYDIEETRV GQKTNYDRLV MEIWTNGTLA PQMAVVEAAK ILRKHLNPFV QYTEPGPELQ
241 LDEPIEIGPN ASVADAANAE LERKLNMSLA ELDLSVRATN CLETEGIQTV RDLVIRSPEE
301 LLEVRNFGET TLREVKSKLE ERGLALGMRI PPRRG
//